Histone 3D structures

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{{#tree:id=OrganizedByTopic|openlevels=0|
{{#tree:id=OrganizedByTopic|openlevels=0|
-
*Histone
+
*Histones
-
**[[2xd7]], [[1zr3]], [[1zr5]], [[2fxk]] – hH2A macro domain – human<BR />
+
**[[2xd7]], [[1zr3]], [[2fxk]], [[1zr5]] – hH2A macro domain – human<br />
 +
**[[6hq1]] – hH1.0 - NMR<br />
**[[4cay]] – hH2A +H2B<br />
**[[4cay]] – hH2A +H2B<br />
-
**[[3iid]], [[3iif]] – hH2A macro domain + ADP-ribose<BR />
+
**[[1yd9]] – H2A macro domain – rat<br />
-
**[[1yd9]] – H2A macro domain – rat<BR />
+
**[[1ghc]] – cH1 – chicken – NMR<br />
-
**[[1ghc]] – cH1 – chicken - NMR<br />
+
**[[1hst]] – cH5<br />
-
**[[1hst]] – cH5 <BR />
+
**[[2xql]], [[3c9k]] - cH3.2 + H4 + H2A + H2B – Cryo EM<br />
-
**[[1yqa]] – yH1 (mutant) – yeast – NMR<BR />
+
**[[6k01]], [[6w4l]] - XlH2A/H2B - Xenopus laevis <br />
-
**[[1uss]], [[1ust]], [[1uhm]] – yH1 globular domain - NMR<BR />
+
**[[6k03]] - CeH2A + H2B – Caenorhabditis elegans<br />
-
**[[1ku5]] – HPHA – ''Pyrococcus horikoshii''<BR />
+
**[[1yqa]] – yH1 (mutant) – yeast – NMR<br />
-
**[[1b67]], [[1b6w]], [[1a7w]], [[1hta]] – MfHMFA – ''Methanococcus fervidus''<BR />
+
**[[1uss]], [[1ust]], [[1uhm]] – yH1 globular domain – NMR<br />
-
**[[1bfm]] – MfHB - NMR<BR />
+
**[[1ku5]] – HPHA – Pyrococcus horikoshii<br />
-
**[[1f1e]] – H – ''Methanopyrus kandleri''<BR />
+
**[[1b67]], [[1b6w]], [[1a7w]], [[1hta]] – MfHMFA – Methanococcus fervidus<br />
-
**[[2g9a]], [[2g99]], [[2h13]] – H3 + WD-repeat protein<br />
+
**[[1bfm]] – MfHB - NMR<br />
-
**[[1pfb]] – H3 + polycomb protein – ''Strongylocentrus purpuratus''
+
**[[1f1e]] – H – Methanopyrus kandleri<br />
-
*Nucleosome core
+
*Histones complex with protein
-
**[[6n89]], [[6n88]] – hH1 + importin – Cryo EM<br />
+
**[[6n89]], [[6n88]] – hH1.0 + importin – Cryo EM<br />
**[[6h8p]] – hH1 + histone-lysine methyltransferase <br />
**[[6h8p]] – hH1 + histone-lysine methyltransferase <br />
-
**[[3r45]] - hH4 + H3-like centromeric protein + Holliday junction recognition protein<BR />
+
**[[3r45]] - hH4 + H3-like centromeric protein + Holliday junction recognition protein<br />
-
**[[3nqj]], [[3nqu]] - hH4 + H3-like centromeric protein<BR />
+
**[[3nqj]], [[3nqu]] - hH4 + H3-like centromeric protein<br />
**[[5vey]] - hH2A + H2B + polyubiquitin<br />
**[[5vey]] - hH2A + H2B + polyubiquitin<br />
**[[5fug]] - hH2A + H2B + YL-1<br />
**[[5fug]] - hH2A + H2B + YL-1<br />
Line 35: Line 36:
**[[5ja4]], [[5bnv]] – hH3.3 + H4 + TONSL + MCM2<br />
**[[5ja4]], [[5bnv]] – hH3.3 + H4 + TONSL + MCM2<br />
**[[5bo0]], [[5bnx]] – hH3.2 + H4 + ASF1B + MCM2<br />
**[[5bo0]], [[5bnx]] – hH3.2 + H4 + ASF1B + MCM2<br />
-
**[[6mlc]] - hH4 + histone-lysine methyltransferase <br />
+
**[[6mlc]] - hH4 + histone-lysine methyltransferase <br />
-
**[[6qxz]] – hH3.3 + histone-lysine methyltransferase - NMR<br />
+
**[[6hbo]] – hH3.3 + histone-lysine methyltransferase - NMR<br />
-
**[[3qzs]], [[3qzt]] – XlH4 + nucleosome-remodeling factor subunit BPTF – ''Xenopus laevis''<BR />
+
**[[6vil]] – hH3.1 + BAHCC1<br />
 +
**[[7ciz]] – hH3.3 + H4 + MCM2<br />
 +
**[[3iid]], [[3iif]] – hH2A macro domain + ADP-ribose<br />
 +
**[[3qzs]], [[3qzt]]– XlH4 + nucleosome-remodeling factor subunit BPTF <br />
**[[6o7g]] - XlH4 + histone-lysine methyltransferase – NMR<br />
**[[6o7g]] - XlH4 + histone-lysine methyltransferase – NMR<br />
-
**[[4h9n]], [[4h9o]], [[4h9p]], [[4h9q]], [[4h9r]], [[4h9s]], [[4hga]] - XlH3.3 (mutant) + H4 + death domain-associated protein 6<br />
+
**[[4h9n]], [[4h9o]], [[4h9p]], [[4h9q]], [[4h9r]], [[4h9s]], [[4hga]] - XlH3.3 (mutant) + H4 + death domain-associated protein <br />
**[[5kdm]] - XlH3.3 + H4 + death domain-associated protein + tegument protein<br />
**[[5kdm]] - XlH3.3 + H4 + death domain-associated protein + tegument protein<br />
-
**[[2io5]] - XlH3.1 + H4 + anti-silencing protein<BR />
+
**[[2io5]] - XlH3.1 + H4 + anti-silencing protein<br />
-
**[[6k01]], [[6w4l]] - XlH2A + H2B <br />
+
**[[5g2e]], [[6k00]] - XlH2A + H2B + NAP1<br />
**[[5g2e]], [[6k00]] - XlH2A + H2B + NAP1<br />
**[[6n1z]] - XlH2A + H2B + importin<br />
**[[6n1z]] - XlH2A + H2B + importin<br />
Line 49: Line 52:
**[[4eo5]] - XlH3.2 (mutant) + H4 (mutant) + histone chaperone ASF1<br />
**[[4eo5]] - XlH3.2 (mutant) + H4 (mutant) + histone chaperone ASF1<br />
**[[4ld9]] - XlH3.2 + H4 + H2A + H2B + widom sequence reverse + SIR3<br />
**[[4ld9]] - XlH3.2 + H4 + H2A + H2B + widom sequence reverse + SIR3<br />
-
**[[2xql]], [[3c9k]] - cH3.2 + H4 + H2A + H2B – Cryo EM<br />
 
-
**[[6k03]] - CeH2A + H2B – ''Caenorhabditis elegans''<br />
 
**[[6k09]], [[6k0c]] - CeH2A + H2B + NAP1<br />
**[[6k09]], [[6k0c]] - CeH2A + H2B + NAP1<br />
-
**[[2l5a]] - yH4/H3-like centromeric protein/SCM3<BR />
+
**[[6m2m]] – AtH2A + H2B + OSCHZ1 – Arabidopsis thaliana<br />
-
**[[2jss]] - yH2A/H2B + CHZ1 – NMR<BR />
+
**[[7c7x]] – AtH2A + H2B + NAP1 <br />
 +
**[[2l5a]] - yH4/H3-like centromeric protein/SCM3 <br />
 +
**[[2jss]] - yH2A/H2B + CHZ1 – NMR<br />
**[[4wnn]] – yH32A + H2B + SPT2<br />
**[[4wnn]] – yH32A + H2B + SPT2<br />
-
**[[2hue]] - yH3 + H4 + anti-silencing protein<BR />
+
**[[2hue]] - yH3 + H4 + anti-silencing protein
-
**[[4uuz]] – DmH3 + H4 + DNA replication licensing factor – ''Drosophila melanogaster''<br />
+
**[[4uuz]] – DmH3 + H4 + DNA replication licensing factor – Drosophila melanogaster<br />
-
**[[2yfv]], [[2yfw]] - H4 + H3-like centromeric protein + SCM3 – ''Kluyveromyces lactis''<BR />
+
**[[2yfv]], [[2yfw]] - KlH4 + H3-like centromeric protein + SCM3 – Kluyveromyces lactis<br />
 +
**[[6uph]] - Kl H3-like centromeric protein + H4 + H2A + H2B in nucleosome – Cryo EM<br />
 +
**[[1pfb]] – H3 + polycomb protein – Strongylocentrus purpuratus<br />
*Human nucleosome core + DNA
*Human nucleosome core + DNA
-
**[[3an2]], [[4x23]] – hH4 + H2A + H2B + H3-like centromeric protein + DNA<BR />
+
**[[3av1]], [[2av2]], [[3av2]], [[3waa]], [[3wa9]], [[3w99]], [[3w98]], [[3w97]], [[3w96]], [[5x7x]], [[3a6n]], [[3afa]], [[2cv5]], [[5jrg]], [[5gxq]], [[5gt3]], [[5gt0]], [[5gsu]], [[5gse]], [[5cpk]], [[5cpj]], [[5cpi]], [[5b33]], [[5b32]], [[5b31]], [[5b2j]], [[5b2i]], [[5b24]], [[5b0z]], [[5b0y]], [[5ay8]], [[5avc]], [[5avb]], [[5av9]], [[5av8]], [[5av6]], [[5av5]], [[5z5t]], [[4ym6]], [[4ym5]], [[5y0c]], [[5onw]], [[5ong]], [[5omx]], [[6hkt]], [[6jou]], [[6jr0]], [[6jr1]], [[6k1i]], [[6k1j]], [[6j1k]], [[6ke9]], [[6l9h]], [[6le9]], [[6ipu]], [[6iq4]], [[6jxd]], [[6kvd]], [[6ler]], [[6m3v]], [[6m44]], [[6v2k]] – hH3.1 + H4 + H2A + H2B in nucleosome<br />
-
**[[3av1]], [[2av2]], [[3av2]], [[3waa]], [[3wa9]], [[3w99]], [[3w98]], [[3w97]], [[3w96]], [[5x7x]], [[3a6n]], [[3afa]], [[2cv5]], [[5jrg]], [[5gxq]], [[5gt3]], [[5gt0]], [[5gsu]], [[5gse]], [[5cpk]], [[5cpj]], [[5cpi]], [[5b33]], [[5b32]], [[5b31]], [[5b2j]], [[5b2i]], [[5b24]], [[5b0z]], [[5b0y]], [[5ay8]], [[5avc]], [[5avb]], [[5av9]], [[5av8]], [[5av6]], [[5av5]], [[5z5t]], [[4ym6]], [[4ym5]], [[5y0c]], [[5onw]], [[5ong]], [[5omx]], [[6ipu]], [[6iq4]], [[6jou]], [[6jr0]], [[6jr1]], [[6jxd]], [[6k1i]], [[6k1j]], [[6j1k]], [[6ke9]], [[6kvd]], [[6l9h]], [[6le9]] – hH3.2 + H4 + H2A + H2B + DNA<BR />
+
**[[6r0c]], [[6t79]], [[6r94]], [[6r93]], [[6l4a]], [[6t93]], [[7nl0]] – hH3 + H4 + H2A + H2B in nucleosome – Cryo EM<br />
-
**[[6r0c]], [[6t79]], [[6r94]], [[6r93]], [[6l4a]], [[6t93]] – hH3 + H4 + H2A + H2B + DNA – Cryo EM<br />
+
**[[5z30]] – hH3.1 + H4 + H2A (mutant) + H2B in nucleosome<br />
-
**[[5x0y]], [[5x0x]] – hH3 + H4 + H2A + H2B + DNA + SNF2<br />
+
**[[5y0d]] – hH3.1 + H4 + H2A + H2B (mutant) in nucleosome<br />
-
**[[5z30]] – hH3.1 + H4 + H2A (mutant) + H2B + DNA <br />
+
**[[4qlc]] – hH3 + H4 + H2A + H2B + H5 in nucleosome<br />
-
**[[5y0d]] – hH3.1 + H4 + H2A + H2B (mutant) + DNA <br />
+
**[[3ayw]], [[3aze]], [[3azf]], [[3azg]], [[3azh]], [[5b40]] - hH3 (mutant) + H4 + H2A + H2B in nucleosome<br />
-
**[[4qlc]] – hH3 + H4 + H2A + H2B + H5 + DNA <br />
+
**[[3azi]], [[3azj]], [[3azk]], [[3azl]], [[3azm]], [[3azn]] - hH3.1 + H4 (mutant) + H2A + H2B in nucleosome<br />
-
**[[6r25]] – hH3 + H4 + H2A + H2B + NPAC + lysine-specific histone demethylase + DNA – Cryo EM<br />
+
**[[7lya]] - hH3.1 + H4 + H2B in nucleosome – Cryo EM<br />
-
**[[3ayw]], [[3aze]], [[3azf]], [[3azg]], [[3azh]] - hH3.1 (mutant) + H4 + H2A + H2B + DNA<br />
+
**[[6l49]], [[6l9z]], [[6m4d]], [[6m4g]], [[6m4h]], [[6r25]] - hH3.1 + H4 + H2A + H2B in nucleosome – Cryo EM<br />
-
**[[6r94]], [[6r93]] - hH3.1 + H4 + H2A + H2B + DNA – Cryo EM<br />
+
**[[6pwx]] - hH3.2 + H4 + H2A + H2B in nucleosome – Cryo EM<br />
-
**[[6r92]], [[6r91]], [[6r90]], [[6r8z]], [[6r8y]] - hH3.1 + H4 + H2A + H2B + DNA damage-binding protein + DNA – Cryo EM<br />
+
**[[5xf5]], [[5xf4]], [[5xf3]] - hH3.1 + H4 + H2A + H2B in nucleosome + Ru derivative<br />
-
**[[3azi]], [[3azj]], [[3azk]], [[3azl]], [[3azm]], [[3azn]], [[5b40]] - hH3.1 + H4 (mutant) + H2A + H2B + DNA<br />
+
 
-
**[[5e5a]] - hH3.2 + H4 + H2A + H2B + IE1 + DNA<br />
+
* Human nucleosome core + DNA complex with protein
-
**[[6pwx]] - hH3.2 + H4 + H2A + H2B + RBBP-5 + DNA – Cryo EM<br />
+
 
-
**[[6t7a]], [[6t7b]], [[6t7c]], [[6t7d]] - hH3.2 + H4 + H2A + H2B + SOX + DNA – Cryo EM<br />
+
**[[5x0y]], [[5x0x]] – hH3 + H4 + H2A + H2B in nucleosome + SNF2<br />
-
**[[6t90]], [[6yov]] - hH3.2 + H4 + H2A + H2B + SOX + OCT4 + DNA – Cryo EM<br />
+
**[[3an2]], [[4x23]] – hH4 + H2A + H2B in nucleosome + H3-like centromeric protein <br />
-
**[[6rny]] - hH3.3 + H4 + H2A + H2B + integrase + DNA – Cryo EM<br />
+
**[[6r25]] – hH3 + H4 + H2A + H2B in nucleosome + NPAC + lysine-specific histone demethylase – Cryo EM<br />
-
**[[6upk]], [[6upl]] - hH3.1 + H4 + H2A + H2B + FACT complex + DNA – Cryo EM<br />
+
**[[6r92]], [[6r91]], [[6r90]], [[6r8z]], [[6r8y]] - hH3.1 + H4 + H2A + H2B in nucleosome + DNA damage-binding protein – Cryo EM<br />
-
**[[6v92]] – hH3 + H4 + H2A + H2B + RSC complex + DNA – Cryo EM<br />
+
**[[5e5a]] - hH3.2 + H4 + H2A + H2B in nucleosome + IE1<br />
-
**[[6hkt]] - hH3 + H2A + H2B + DNA <br />
+
**[[7lyb]] - hH3.1 + H4 + H2B in nucleosome + BRCA1 + BARD1 +UbCH5C – Cryo EM<br />
-
**[[5xf5]], [[5xf4]], [[5xf3]] - hH3.1 + H4 + H2A + H2B + Ru derivative + DNA<br />
+
**[[7jzv]] - hH3.2 (mutant) + H4 + H2A + H2B in nucleosome + BRAC1 – Cryo EM<br />
 +
**[[6uxw]] - hH3.3 + H4 + H2A + H2B in nucleosome + SWI/SNF complex – Cryo EM<br />
 +
**[[7ea8]] - hH3.3 + H4 + H2A + H2B in nucleosome + SETD2 – Cryo EM<br />
 +
**[[7d1z]] - hH3.1 + H4 + H2A + H2B in nucleosome + SET8 – Cryo EM<br />
 +
**[[6muo]], [[6mup]], [[7bxt]], [[7by0]] - hH4 + H2A + H2B in nucleosome + CenP-A + CenP-C + CenP-N – Cryo EM<br />
 +
**[[6x59]], [[6x5a]], [[6xjd]], [[6y5d]], [[6y5e]], [[7jo9]], [[7joa]] - hH3.3 + H4 + H2A + H2B in nucleosome + cGAS – Cryo EM<br />
 +
**[[7c0m]], [[7ccq]], [[7ccr]] - hH3.1 + H4 + H2A + H2B in nucleosome + cGAS – Cryo EM<br />
 +
**[[7bwd]] - hH3.1 + H4 + H2A + H2B in nucleosome + DOT1 + ubiquitin – Cryo EM<br />
 +
**[[7lyc]] - hH3.1 + H4 + H2A + H2B in nucleosome + BARD1 + ubiquitin – Cryo EM<br />
 +
**[[6usj]] - hH3.1 + H4 + H2A + H2B in nucleosome + PARP2 – Cryo EM<br />
 +
**[[6t7a]], [[6t7b]], [[6t7c]], [[6t7d]] - hH3.2 + H4 + H2A + H2B in nucleosome + SOX – Cryo EM<br />
 +
**[[6t90]], [[6yov]] - hH3.2 + H4 + H2A + H2B in nucleosome + SOX + OCT4 – Cryo EM<br />
 +
**[[6rny]] - hH3.3 + H4 + H2A + H2B in nucleosome + integrase – Cryo EM<br />
 +
**[[6upk]], [[6upl]] - hH3.1 + H4 + H2A + H2B in nucleosome + FACT complex – Cryo EM<br />
 +
**[[6v92]] – hH3.1 + H4 + H2A + H2B in nucleosome + RSC complex – Cryo EM<br />
 +
**[[6fml]] – hH3.2 + H4 + H2A + H2B in nucleosome + RuvB + actin-related protein + IES6 - Cryo EM<br />
*Xenopus nucleosome core + DNA
*Xenopus nucleosome core + DNA
-
**[[6r1t]], [[6px1]] - XlH3 + H2A + H2B + DNA – Cryo EM<br />
+
**[[6r1t]], [[6px1]] - XlH3 + H2A + H2B in nucleosome – Cryo EM<br />
-
**[[3mnn]], [[3o62]], [[3lz0]], [[3lz1]], [[3lel]], [[3kuy]], [[3c1b]], [[3c1c]], [[2nzd]], [[2fj7]], [[1zbb]], [[1s32]], [[1p34]], [[1p3a]], [[1p3b]], [[1p3f]], [[1p3g]], [[1p3i]], [[1p3k]], [[1p3l]], [[1p3m]], [[1p3o]], [[1p3p]], [[1m18]], [[1m19]], [[1m1a]], [[1kx3]], [[1kx4]], [[1kx5]], [[1aoi]], [[3reh]], [[3rei]], [[3rej]], [[3rek]], [[3rel]], [[3ut9]], [[3uta]], [[3utb]], [[5f99]], [[5dnn]], [[5dnm]], [[5cp6]], [[4z66]], [[4ys3]], [[4xzq]], [[5oy7]], [[5oxv]] - XlH3.2 + H4 + H2A + H2B + DNA<BR />
+
**[[3mnn]], [[3o62]], [[3lz0]], [[3lz1]], [[3lel]], [[3kuy]], [[3c1b]], [[3c1c]], [[2nzd]], [[2fj7]], [[1zbb]], [[1s32]], [[1p34]], [[1p3a]], [[1p3b]], [[1p3f]], [[1p3g]], [[1p3i]], [[1p3k]], [[1p3l]], [[1p3m]] [[1p3o]], [[1p3p]], [[1m18]], [[1m19]], [[1m1a]], [[1kx3]], [[1kx4]], [[1kx5]], [[1aoi]], [[3reh]], [[3rei]], [[3rej]], [[3rek]], [[3rel]], [[3ut9]], [[3uta]], [[3utb]], [[5f99]], [[5dnn]], [[5dnm]], [[5cp6]], [[4z66]], [[4ys3]], [[4xzq]], [[5oy7]], [[5oxv]] - XlH3.2 + H4 + H2A + H2B in nucleosome<br />
-
**[[6fq8]], [[6fq6]], [[6fq5]], [[6esi]], [[6esh]], [[6esg]], [[6esf]] - XlH3.2 + H4 + H2A + H2B + DNA – Cryo EM<br />
+
**[[6wz5]], [[6wz9]], [[7ohc]] - XlH3.2 + H4 + H2A + H2B in nucleosome - Cryo EM<br />
-
**[[5nl0]] - XlH3.2 + H4 + H2A + H2B + H1.0 + DNA<br />
+
**[[7ktq]] - XlH3 + H4 + H2A + H2B in nucleosome – Cryo EM<br />
-
**[[6om3]] - XlH3.2 + H4 + H2A + H2B + origin recognition complex + DNA<br />
+
**[[6esi]], [[6esh]], [[6esg]], [[6esf]], [[6fq8]], [[6fq6]], [[6fq5]], [[6nn6]], [[6nog]], [[6nzo]], [[6px3]], [[6r1u]], [[6ugm]] - XlH3.2 + H4 + H2A + H2B in nucleosome – Cryo EM<br />
-
**[[6vyp]] - XlH3 + H4 + H2A + H2B + LSD1 + COREST + DNA<br />
+
**[[4xuj]] - XlH3.2 + H4 + H2A + H2B in nucleosome + Ru derivative<br />
-
**[[6jm9]], [[6nzo]], [[6px3]] - XlH3.2 + H4 + H2A + H2B + histone-lysine methyltransferase + DNA – Cryo EM<br />
+
**[[4xu9]] - XlH3.2 (mutant) + H4 + H2A + H2B in nucleosome + Pt derivative<br />
-
**[[6ryr]], [[6ryu]] - XlH3.2 + H4 + H2A + H2B + CHD4 + DNA – Cryo EM<br />
+
**[[4xu8]] - XlH3.2 + H4 + H2A + H2B (mutant) in nucleosome + Pt derivative<br />
-
**[[6s01]] - XlH3.2 + H4 + H2A + H2B + PC4 and SFRS1-interacting protein + DNA – Cryo EM<br />
+
**[[2f8n]] - XlH3.1 + H4 + H2A + H2B + H3 + H2A macro domain in nucleosome<br />
-
**[[6o96]], [[6nqa]], [[6nog]], [[6nn6]], [[6nj9]], [[6jma]], [[6j99]] - XlH3.2 + H4 + H2A + H2B + histone-lysine methyltransferase + ubiquitin + DNA – Cryo EM<br />
+
**[[1zla]] – XlH3 + H4 + H2A + H2B + H3 in nucleosome + antigen
-
**[[6pa7]] - XlH3.2 + H4 + H2A + H2B + DMMT3A + DMMT3B + DNA – Cryo EM<br />
+
**[[3mgp]], [[3mgq]], [[3mgr]], [[3mgs]], [[3lja,]] [[3b6f]], [[3b6g]], [[4j8u]], [[4j8v]], [[4j8w]], [[4j8x]], [[4kgc]], [[5xf6]] - XlH3.2 + H4 + H2A + H2B in nucleosome + metal<br />
-
**[[6kiu]], [[6kiv]], [[6kiw]], [[6kix]], [[6kiz]] - XlH3 + H4 + H2A + H2B + histone-lysine methyltransferase + RBBP-5 + ASH2-like protein + WD repeat-containing protein + ubiquitin + DNA – Cryo EM<br />
+
**[[3kxb]] - XlH3.2 (mutant) + H4 + H2A + H2B (mutant) in nucleosome <br />
-
**[[6iy3]], [[6iy2]] - XlH3.2 + H4 + H2A + H2B + SNF2H + ADP + DNA – Cryo EM<br />
+
**[[3kwq]] - XlH3.2 (mutant) + H4 + H2A + H2B in nucleosome<br />
-
**[[5o9g]] - XlH3.2 + H4 + H2A + H2B + CHD1 + DNA – Cryo EM<br />
+
 
-
**[[6ftx]] - XlH3.1 + H4 + H2A + H2B + CHD1 + ubiquitin + DNA – Cryo EM<br />
+
 
-
**[[6hts]] - XlH3.1 + H4 + H2A + H2B + RuvB + CHD1 + actin-related protein + DNA – Cryo EM<br />
+
*Xenopus nucleosome core + DNA complex with protein
-
**[[6ne3]] - XlH3.2 (mutant) + H4 + H2A (mutant) + H2B + SNF2H + DNA – Cryo EM<br />
+
 
-
**[[5mlu]] - XlH3.2 + H4 + H2A + H2B + PFV GAG peptide + DNA<br />
+
**[[6pwx]] - XlH3.2 + H4 + H2A + H2B in nucleosome + RBBP5 - Cryo EM<br />
-
**[[5kgf]] - XlH3.2 + H4 + H2A + H2B + 53BP1 + ubiquitin + DNA<br />
+
**[[6pww]] - XlH3.2 + H4 + H2A + H2B in nucleosome + RBBP5 + WDR5 - Cryo EM<br />
-
**[[5hq2]] - XlH3.2 + H4 + H2A + H2B + SRM1 + SetD8 + DNA<br />
+
**[[6om3]] - XlH3.2 + H4 + H2A + H2B in nucleosome + origin recognition complex <br />
-
**[[4zux]] - XlH3.2 + H4 + H2A + H2B + Saga-associated factors + polyubiquitin + UBP8 + DNA<br />
+
**[[6vyp]] - XlH3 (mutant) + H4 + H2A (mutant) + H2B (mutant) in nucleosome + LSD1 + COREST<br />
-
**[[4xuj]] - XlH3.2 + H4 + H2A + H2B + Ru derivative + DNA<br />
+
**[[6ryr]], [[6ryu]] - XlH3.2 + H4 + H2A + H2B in nucleosome + CHD4 – Cryo EM<br />
-
**[[4xu9]] - XlH3.2 (mutant) + H4 + H2A + H2B + Pt derivative + DNA<br />
+
**[[7crp]], [[7crr]] - XlH3 + H4 + H2A + H2B in nucleosome + NSD3 – Cryo EM<br />
-
**[[4xu8]] - XlH3.2 + H4 + H2A + H2B (mutant) + Pt derivative + DNA<br />
+
**[[7crq]] - XlH3.2 + H4 + H2A + H2B in nucleosome + NSD3 – Cryo EM<br />
-
**[[2f8n]] - XlH3.1 + H4 + H2A + H2B + H3 + H2A macro domain + DNA<BR />
+
**[[7at8]] - XlH3 + H4 + H2A + H2B in nucleosome + EZH2 + SUZ12 – Cryo EM<br />
-
**[[1zla]] – XlH3 + H4 + H2A + H2B + H3 + antigen + DNA<BR />
+
**[[6vz4]] - XlH3 + H4 + H2A + H2B in nucleosome + STH1 + ARP7 + ARP9 + RTT – Cryo EM<br />
-
**[[3mgp]], [[3mgq]], [[3mgr]], [[3mgs]], [[3lja]], [[3b6f]], [[3b6g]], [[4j8u]], [[4j8v]], [[4j8w]], [[4j8x]], [[4kgc]], [[5xf6]] - XlH3.2 + H4 + H2A + H2B + metal ion + DNA<BR />
+
**[[6kiu]], [[6kiv]], [[6kiw]], [[6kix]], [[6kiz]], [[6pwv]], [[6w5i]], [[6w5m]], [[6w5n]] - XlH3.2 + H4 + H2A + H2B in nucleosome + MLL1 core complex – Cryo EM<br />
-
**[[3kxb]] - XlH3.2 (mutant) + H4 + H2A + H2B (mutant) + DNA<BR />
+
**[[7ohb]] - XlH3.2 + H4 + H2A + H2B in nucleosome + TBP – Cryo EM<br />
-
**[[3kwq]] - XlH3.2 (mutant) + H4 + H2A + H2B + DNA<BR />
+
**[[7oh9]] - XlH3.2 + H4 + H2A + H2B in nucleosome + TBP + TFIIA – Cryo EM<br />
-
**[[3mvd]] - XlH3.2 + H4 + H2A + H2B + regulator of chromosome condensation + DNA<BR />
+
**[[7ea5]] - XlH3 (mutant) + H4 + H2A + H2B in nucleosome + SET2 – Cryo EM<br />
-
**[[3tu4]] - XlH3.2 + H4 + H2A + H2B + regulatory protein SIR3 + DNA<br />
+
**[[6s01]] - XlH3.2 + H4 + H2A + H2B in nucleosome + PC4 and SFRS1-interacting protein – Cryo EM<br />
-
**[[4r8p]] - XlH3.2 + H4 + H2A + H2B + polycomb complex protein + ring finger protein + DNA<br />
+
**[[6iy3]], [[6iy2]] - XlH3.2 + H4 + H2A + H2B in nucleosome + SNF2H – Cryo EM<br />
-
**[[6r1u]] – XlH3.2 + H4 + H2A + H2B + lysine-specific histone demethylase + DNA – Cryo EM<br />
+
**[[5o9g]] - XlH3.2 + H4 + H2A + H2B in nucleosome + CHD1 – Cryo EM<br />
-
**[[6k1p]], [[6jyl]], [[6iro]] – XlH3 + H4 + H2A + H2B + ISWI + ADP + DNA – Cryo EM<br />
+
**[[6x0n]] - XlH3.2 + H4 + H2A + H2B in nucleosome + PARP2 + HPF1 – Cryo EM<br />
-
**[[6g0l]] – XlH3 + H4 + H2A + H2B + CHD1 + DNA – Cryo EM<br />
+
**[[7nkx]] – XlH3 + H4 + H2A + H2B in nucleosome + CHD1 + RNA polymerase – Cryo EM<br />
-
**[[6kw3]], [[6kw4]], [[6tda]] – XlH3 + H4 + H2A + H2B + RSC complex + DNA – Cryo EM<br />
+
**[[7nky]] – XlH3 + H4 + H2A + H2B in nucleosome + SPT + FACT + RNA polymerase – Cryo EM<br />
-
**[[6rny]] - hH3.3 + H4 + H2A + H2B + integrase + DNA – Cryo EM<br />
+
**[[6jm9]] - XlH3.2 + H4 + H2A + H2B in nucleosome + DOT1 – Cryo EM<br />
-
**[[6t9l]] – XlH3 + H4 + H2A + H2B + SAGA complex + DNA – Cryo EM<br />
+
**[[6jma]] - XlH3.2 + H4 + H2A + H2B in nucleosome + DOT1 + ubiquitin – Cryo EM<br />
-
**[[6ugm]], [[6uh5]], [[6ven]] – XlH3 + H4 + H2A + H2B + COMPASS complex + DNA – Cryo EM<br />
+
**[[7k6p]] - XlH3.2 (mutant) + H4 + H2A + H2B (mutant) in nucleosome + DOT1 + ubiquitin – Cryo EM<br />
-
**[[6pwv]], [[6pww]] – XlH3 + H4 + H2A + H2B + MLL1 complex + DNA – Cryo EM<br />
+
**[[6nj9]] - XlH3.2 (mutant) + H4 + H2A (mutant) + H2B in nucleosome + DOT1 + ubiquitin – Cryo EM<br />
-
**[[6uxw]] - hH3.3 + H4 + H2A + H2B + SWI/SNF complex + DNA + ADP – Cryo EM<br />
+
**[[6j99]] - XlH3.2 + H4 + H2A + H2B (mutant) in nucleosome + DOT1 + ubiquitin – Cryo EM<br />
 +
**[[6nqa]] - XlH3.2 + H4 + H2A (mutant) + H2B (mutant) in nucleosome + DOT1 + ubiquitin – Cryo EM<br />
 +
**[[6o96]] - XlH3.2 (mutant) + H4 + H2A (mutant) + H2B (mutant) in nucleosome + DOT1 + ubiquitin – Cryo EM<br />
 +
**[[7k6q]] - XlH3.2 (mutant) + H4 (mutant) + H2A (mutant) + H2B (mutant) in nucleosome + DOT1 + ubiquitin – Cryo EM<br />
 +
**[[6ftx]] - XlH3.1 + H4 + H2A + H2B in nucleosome + CHD1 + ubiquitin – Cryo EM<br />
 +
**[[6hts]] - XlH3.1 + H4 + H2A + H2B in nucleosome + RuvB + CHD1 + actin-related protein – Cryo EM<br />
 +
**[[6ne3]] - XlH3.2 (mutant) + H4 + H2A (mutant) + H2B in nucleosome + SNF2H – Cryo EM<br />
 +
**[[5mlu]] - XlH3.2 + H4 + H2A + H2B in nucleosome + PFV GAG peptide<br />
 +
**[[5kgf]] - XlH3.2 + H4 + H2A + H2B in nucleosome + 53BP1 + ubiquitin<br />
 +
**[[5hq2]] - XlH3.2 + H4 + H2A + H2B in nucleosome + SRM1 + SetD8<br />
 +
**[[6ven]] - XlH3.2 (mutant) + H4 + H2A (mutant) + H2B (mutant) in nucleosome + COMPASS + ubiquitin – Cryo EM<br />
 +
**[[6uh5]] - XlH3.2 + H4 + H2A + H2B (mutant) in nucleosome + COMPASS + ubiquitin – Cryo EM<br />
 +
**[[6z6p]] - XlH3.2 + H3 + H4 + H2A + H2B in nucleosome + HDA1 – Cryo EM<br />
 +
**[[6pa7]] - XlH3.2 + H4 + H2A + H2B in nucleosome + DNMT3 – Cryo EM<br />
 +
**[[6wkr]] - XlH3.2 + H3 + H4 + H2A + H2B in nucleosome + PRC2 + JARID2 – Cryo EM<br />
 +
**[[6lth]] - XlH3.2 + H3 + H4 + H2A + H2B in nucleosome + BAF complex – Cryo EM<br />
 +
**[[6zhx]], [[6zhy]], [[7enn]] - XlH3.2 + H3 + H4 + H2A + H2B in nucleosome + ALC1 – Cryo EM<br />
 +
**[[6tem]] - XlH4 + H2A + H2B in nucleosome + CenP-A – Cryo EM<br />
 +
**[[4zux]] – XlH3.2 + H4 + H2A + H2B in nucleosome + Saga-associated factors + polyubiquitin + UBP8<br />
 +
**[[3mvd]] - XlH3.2 + H4 + H2A + H2B in nucleosome + regulator of chromosome condensation<br />
 +
**[[3tu4]] - XlH3.2 + H4 + H2A + H2B in nucleosome + regulatory protein SIR3<br />
 +
**[[4r8p]] - XlH3.2 + H4 + H2A + H2B in nucleosome + polycomb complex protein + ring finger protein<br />
 +
**[[6k1p]], [[6jyl]], [[6iro]] – XlH3 + H4 + H2A + H2B in nucleosome + ISWI – Cryo EM<br />
 +
**[[6kw3]], [[6kw4]], [[6kw5]], [[6tda]] – XlH3 + H4 + H2A + H2B in nucleosome + RSC complex – Cryo EM<br />
 +
**[[6rny]] - hH3.3 + H4 + H2A + H2B in nucleosome + integrase – Cryo EM<br />
 +
**[[6t9l]] – XlH3 + H4 + H2A + H2B in nucleosome + SAGA complex – Cryo EM<br />
*Other nucleosome core + DNA
*Other nucleosome core + DNA
-
**[[1u35]] - mH3.1 + H2A + H2B + His2A macro domain + DNA – mouse<BR />
+
**[[1u35]] - mH3.1 + H2A + H2B + His2A macro domain in nucleosome – mouse<br />
-
**[[5xm1]], [[5xm0]] – mH3 + H4 + H2A + H2B + DNA <br />
+
**[[5xm1]], [[5xm0]] – mH3 + H4 + H2A + H2B in nucleosome<br />
-
**[[1f66]] - XlH3 + mH4 + hH2A + XlH2B + DNA<BR />
+
**[[1f66]] - XlH3 + mH4 + hH2A + XlH2B in nucleosome <br />
-
**[[5b1m]], [[5b1l]] - mH3 + H4 + H2A + H2B + DNA<br />
+
**[[5b1m]], [[5b1l]] - mH3 + H4 + H2A + H2B in nucleosome<br />
-
**[[2aro]], [[1tzy]], [[1hq3]], [[2hio]], [[1hio]] - cH3 + H4 + H2A + H2B<br />
+
**[[2aro]], [[1tzy]], [[1hq3]], [[2hio]], [[1hio]] - cH3 + H4 + H2A + H2B
-
**[[1eqz]] - cH3 + H4 + H2A + H2B + DNA<BR />
+
**[[1eqz]] - cH3 + H4 + H2A + H2B in nucleosome <br />
-
**[[2pyo]], [[2nqb]], [[3nqb]] - DmH3 + H4 + H2A + H2B + DNA <BR />
+
**[[2pyo]], [[3nqb]], [[2nqb]] - DmH3 + H4 + H2A + H2B in nucleosome <br />
-
**[[6pwe]] - DmH3 + H4 + H2A + H2B + DNA – Cryo EM<br />
+
**[[6pwe]] - DmH3 + H4 + H2A + H2B in nucleosome – Cryo EM<br />
-
**[[6pwf]] - DmH3 + H4 + H2A + H2B + chromatin remodeling factor + DNA – Cryo EM<br />
+
**[[6pwf]] - DmH3 + H4 + H2A + H2B in nucleosome + chromatin remodeling factor – Cryo EM<br />
-
**[[5wcu]] - DmH3 + H4 + H2A + H2B + H5 + DNA<br />
+
**[[5wcu]] - DmH3 + H4 + H2A + H2B + H5 in nucleosome<br />
-
**[[4x23]] - DmH3 + H4 + H2A + H2B + centromeric protein C + DNA<br />
+
**[[4x23]] - DmH3 + H4 + H2A + H2B in nucleosome + Cenp-C <br />
-
**[[6dzt]] - DmH3 + H4 + H2A + H2B + antibody + DNA<br />
+
**[[6dzt]] - DmH3 + H4 + H2A + H2B in nucleosome + antibody <br />
-
**[[6j51]], [[6j50]], [[6j4z]], [[6j4y]], [[6j4x]], [[6j4w]], [[6inq]], [[6i84]], [[6a5u]], [[6a5t]], [[6a5r]], [[6a5p]], [[6a5o]], [[6a5l]] – yH3.3 + H4 + H2A + H2B + RNA polymerase + RNA + DNA – Cryo EM<br />
+
**[[6xws]], [[6xwt]] - DmH4 + CenP-A + CAL1 <br />
-
**[[6ir9]] – yH3.3 + H4 + H2A + H2B + RNA polymerase + SPT4 + SPT5 + RNA + DNA – Cryo EM<br />
+
**[[6j51]], [[6j50]], [[6j4z]], [[6j4y]], [[6j4x]], [[6j4w]], [[6inq]], [[6i84]], [[6a5u]], [[6a5t]], [[6a5r]], [[6a5p]], [[6a5o]], [[6a5l]] – yH3.3 + H4 + H2A + H2B in nucleosome + RNA polymerase + RNA – Cryo EM<br />
-
**[[6gen]], [[6gej]] – yH3 + H4 + H2A + H2B + SWI1 + actin-like protein + vacuolar protein sorting-associated + RNA + DNA – Cryo EM<br />
+
**[[6ir9]] – yH3.3 + H4 + H2A + H2B in nucleosome + RNA polymerase + SPT4 + SPT5 + RNA – Cryo EM<br />
-
**[[1id3]] - yH3 + H4 + H2A + H2B + DNA<BR />
+
**[[6gen]], [[6gej]] – yH3 + H4 + H2A + H2B in nucleosome + SWI1 + actin-like protein + vacuolar protein sorting-associated + RNA – Cryo EM<br />
-
**[[4jjn]], [[4kud]] - yH3 + H4 + H2A.2 + H2B.2 + SIR3 + DNA<br />
+
**[[1id3]] - yH3 + H4 + H2A + H2B in nucleosome <br />
 +
[[4jjn]], [[4kud]] - yH3 + H4 + H2A.2 + H2B.2 in nucleosome + SIR3 <br />
**[[5zbb]], [[5zba]] - yH3 + H4 + RTT109 + ASF1<br />
**[[5zbb]], [[5zba]] - yH3 + H4 + RTT109 + ASF1<br />
-
**[[5z3v]], [[5z3u]], [[5z3o]], [[5z3l]] - yH3.2 + H4 + H2A + H2B + SNF2 + ADP + DNA – Cryo EM<br />
+
**[[5z3v]], [[5z3u]], [[5z3t]], [[5z3o]], [[5z3l]] - yH3.2 + H4 + H2A + H2B in nucleosome + SNF2 – Cryo EM<br />
-
**[[6fml]] – H3.2 + H4 + H2A + H2B + RuvB + actin-related protein + IES6 + DNA – ''Chaetomium thermophilum'' - Cryo EM<br />
+
**[[7k7g]] - yH3 + H4 + H2A + H2B in nucleosome + CenP-3 – Cryo EM<br />
-
**[[6kxv]] - H3 + H4 + H2A + H2B + DNA – ''Leishmania major''<br />
+
**[[6qld]] - yH3 + H4 + H2A + H2B in kinetochore + CenP-A – Cryo EM<br />
 +
**[[6kxv]] - H3 + hH4 + hH2A + hH2B in nucleosome – Leishmania major<br />
 +
 
 +
*Chromatosome core + DNA
 +
 
 +
**[[6la2]], [[6la8]], [[6la9]], [[6lab]], [[7cow]] - hH3.1 + H4 + H2A + H2B + H1.0 in chromatosome <br />
 +
**[[7dbp]] - hH3.1 + H4 + H2A + H2B + H1.0 in chromatosome – Cryo EM<br />
 +
**[[7k5x]], [[7k5y]], [[7k60]], [[7k61]], [[7k63]] - hH3.1 + H4 + H2A + H2B + H1.0 in chromatosome + scFv – Cryo EM<br />
 +
**[[5nl0]] - XlH3.2 + H4 + H2A + H2B + H1.0 in chromatosome<br
 +
 
}}
}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 07:51, 5 September 2021

3D Structures of histone

Updated on 05-September-2021 

**6mlc - hH4 + histone-lysine methyltransferase


4jjn, 4kud - yH3 + H4 + H2A.2 + H2B.2 in nucleosome + SIR3

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman

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