1f8v

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[[Image:1f8v.gif|left|200px]]
[[Image:1f8v.gif|left|200px]]
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{{Structure
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|PDB= 1f8v |SIZE=350|CAPTION= <scene name='initialview01'>1f8v</scene>, resolution 3.00&Aring;
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The line below this paragraph, containing "STRUCTURE_1f8v", creates the "Structure Box" on the page.
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|LIGAND= <scene name='pdbligand=A:ADENOSINE-5&#39;-MONOPHOSPHATE'>A</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=U:URIDINE-5&#39;-MONOPHOSPHATE'>U</scene>
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{{STRUCTURE_1f8v| PDB=1f8v | SCENE= }}
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|RELATEDENTRY=[[2bbv|2bbv]], [[1nov|1nov]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1f8v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f8v OCA], [http://www.ebi.ac.uk/pdbsum/1f8v PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1f8v RCSB]</span>
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'''THE STRUCTURE OF PARIACOTO VIRUS REVEALS A DODECAHEDRAL CAGE OF DUPLEX RNA'''
'''THE STRUCTURE OF PARIACOTO VIRUS REVEALS A DODECAHEDRAL CAGE OF DUPLEX RNA'''
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[[Category: Tang, L.]]
[[Category: Tang, L.]]
[[Category: Yeager, M.]]
[[Category: Yeager, M.]]
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[[Category: beta-sandwich]]
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[[Category: Beta-sandwich]]
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[[Category: coat protein]]
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[[Category: Coat protein]]
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[[Category: gamma polypeptide]]
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[[Category: Gamma polypeptide]]
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[[Category: icosahedral virus]]
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[[Category: Icosahedral virus]]
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[[Category: nodavirus]]
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[[Category: Nodavirus]]
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[[Category: nucleoprotein]]
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[[Category: Nucleoprotein]]
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[[Category: protein-rna interaction]]
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[[Category: Protein-rna interaction]]
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[[Category: rna cage]]
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[[Category: Rna cage]]
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[[Category: rna duplex]]
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[[Category: Rna duplex]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 16:02:28 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 20:18:09 2008''
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Revision as of 13:02, 2 May 2008

Image:1f8v.gif

Template:STRUCTURE 1f8v

THE STRUCTURE OF PARIACOTO VIRUS REVEALS A DODECAHEDRAL CAGE OF DUPLEX RNA


Overview

The 3.0 A resolution crystal structure of Pariacoto virus (PaV) reveals extensive interactions between portions of the viral RNA genome and the icosahedral capsid. Under the protein shell of the T = 3 quasi equivalent capsid lies a dodecahedral cage composed of RNA duplex that accounts for approximately 35% of the single-stranded RNA genome. The highly basic N-terminal regions (residues 7-54) of the subunits, forming pentamers (A subunits) are clearly visible in the density map and make numerous interactions with the RNA cage. The C-terminal segments (residues 394-401) of the A subunits lie in channels near the quasi three-fold axes. Electron cryo-microscopy and image reconstruction of PaV particles clearly show the dodecahedral RNA cage.

About this Structure

1F8V is a Protein complex structure of sequences from Pariacato virus. Full crystallographic information is available from OCA.

Reference

The structure of pariacoto virus reveals a dodecahedral cage of duplex RNA., Tang L, Johnson KN, Ball LA, Lin T, Yeager M, Johnson JE, Nat Struct Biol. 2001 Jan;8(1):77-83. PMID:11135676 Page seeded by OCA on Fri May 2 16:02:28 2008

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