6ugk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==CRYSTAL STRUCTURE OF CIRCULARLY PERMUTED HUMAN TASPASE-1==
==CRYSTAL STRUCTURE OF CIRCULARLY PERMUTED HUMAN TASPASE-1==
-
<StructureSection load='6ugk' size='340' side='right'caption='[[6ugk]]' scene=''>
+
<StructureSection load='6ugk' size='340' side='right'caption='[[6ugk]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6UGK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6UGK FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6ugk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6UGK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6UGK FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ugk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ugk OCA], [https://pdbe.org/6ugk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ugk RCSB], [https://www.ebi.ac.uk/pdbsum/6ugk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ugk ProSAT]</span></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TASP1, C20orf13 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ugk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ugk OCA], [https://pdbe.org/6ugk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ugk RCSB], [https://www.ebi.ac.uk/pdbsum/6ugk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ugk ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[[https://www.uniprot.org/uniprot/TASP1_HUMAN TASP1_HUMAN]] Protease involved in MLL processing and, consequently, in the correct expression of the early HOXA gene cluster.
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Taspase1 is an Ntn-hydrolase overexpressed in primary human cancers, coordinating cancer cell proliferation, invasion, and metastasis. Loss of Taspase1 activity disrupts proliferation of human cancer cells in vitro and in mouse models of glioblastoma. Taspase1 is synthesized as an inactive proenzyme, becoming active upon intramolecular cleavage. The activation process changes the conformation of a long fragment at the C-terminus of the alpha subunit, for which no full-length structural information exists and whose function is poorly understood. We present a cloning strategy to generate a circularly permuted form of Taspase1 to determine the crystallographic structure of active Taspase1. We discovered that this region forms a long helix and is indispensable for the catalytic activity of Taspase1. Our study highlights the importance of this element for the enzymatic activity of Ntn-hydrolases, suggesting that it could be a potential target for the design of inhibitors with potential to be developed into anticancer therapeutics.
 +
 +
Structural insights into the function of the catalytically active human Taspase1.,Nagaratnam N, Delker SL, Jernigan R, Edwards TE, Snider J, Thifault D, Williams D, Nannenga BL, Stofega M, Sambucetti L, Hsieh JJ, Flint AJ, Fromme P, Martin-Garcia JM Structure. 2021 Mar 25. pii: S0969-2126(21)00081-2. doi:, 10.1016/j.str.2021.03.008. PMID:33784495<ref>PMID:33784495</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 6ugk" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Human]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Delker SL]]
+
[[Category: Delker, S L]]
-
[[Category: Edwards TE]]
+
[[Category: Edwards, T E]]
 +
[[Category: Circular permutation]]
 +
[[Category: Hydrolase]]
 +
[[Category: Mll]]
 +
[[Category: Taspase-1]]

Revision as of 06:56, 22 September 2021

CRYSTAL STRUCTURE OF CIRCULARLY PERMUTED HUMAN TASPASE-1

PDB ID 6ugk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools