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Ion channels 3D structures

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Line 90: Line 90:
**[[5yua]] - AbNaVab – ''Arcobacter butzleri''<br />
**[[5yua]] - AbNaVab – ''Arcobacter butzleri''<br />
**[[5yuc]], [[5yub]] - AbNaVab (mutant) <br />
**[[5yuc]], [[5yub]] - AbNaVab (mutant) <br />
 +
 +
*Sodium channel, pre-activated. NavAb
 +
 +
**[[4ekw]], [[4mw8]], [[5vb2]], [[5yua]], [[6mwa]] - AbNaVab – ''Arcobacter butzleri''<br />
 +
**[[3rvy]], [[3rvz]], [[3rw0]], [[5yuc]], [[5yub]], [[6c1e]], [[6c1m]], [[6mwb]], [[6mwd]], [[6mwg]], [[6p6w]], [[6p6x]], [[6p6y]] - AbNaVab (mutant) <br />
 +
**[[6mvv]], [[6mvy]] - AbNaVab (mutant) + lidocaine <br />
 +
**[[6ke5]] - AbNaVab + drug <br />
 +
 +
*Sodium channel, activated. NavMs
 +
 +
**[[3zjz]], [[4cbc]], [[4f4l]], [[4x89]], [[4x8a]], [[5bzb]], [[5hvx]] – MmNavMs – ''Magnetococcus marinus'' <br />
 +
**[[4x88]], [[5hvd]], [[6sx5]], [[6sx7]], [[6yz2]] – MmNavMs (mutant) <br />
 +
**[[4osx]], [[4p2z]], [[4p30]], [[4p9o]], [[4p9p]], [[4pa3]], [[4pa4]], [[4pa6]], [[4pa7]], [[4pa9]] – MmNavMs + blocker<br />
 +
**[[6sxg]] – MmNavMs + tamoxifen derivative<br />
 +
**[[6sxc]], [[6sxe]], [[6sxf]], [[6z8c]] – MmNavMs (mutant) + tamoxifen derivative<br />
 +
**[[6yz0]] – MmNavMs (mutant) + cannabidiol<br />
* NH4+ channel
* NH4+ channel
Line 103: Line 119:
**[[3hzq]] – MscL – ''Staphylococcus aureus''<br />
**[[3hzq]] – MscL – ''Staphylococcus aureus''<br />
-
**[[2oar]] – MscL – ''Mycobacterium tuberculosis''<br />
+
**[[2oar]], [[6ctd]] – MtMscL – ''Mycobacterium tuberculosis''<br />
**[[4lku]] – EcMscL C terminal<br />
**[[4lku]] – EcMscL C terminal<br />
-
**[[4y7k]], [[4y7j]] – MscL – Methanosarcina acetivorans<br />
+
**[[4y7k]], [[4y7j]] – MscL – ''Methanosarcina acetivorans''<br />
**[[2oau]], [[2vv5]], [[4hwa]] - EcMscS<br />
**[[2oau]], [[2vv5]], [[4hwa]] - EcMscS<br />
 +
**[[6pwn]], [[6pwo]], [[6pwp]], [[6rld]], [[6uzh]], [[6vyk]], [[6vyl]], [[6vym]], [[7onj]], [[7onl]], [[7oo0]], [[7oo6]], [[7oo8]], [[7ooa]] – EcMscS – Cryo EM<br />
**[[4age]], [[4agf]], [[5aji]] – EcMscS (mutant)<br />
**[[4age]], [[4agf]], [[5aji]] – EcMscS (mutant)<br />
**[[3t9n]], [[3udc]] – MscS – ''Thermoanaerobacter tengcongensis''<br />
**[[3t9n]], [[3udc]] – MscS – ''Thermoanaerobacter tengcongensis''<br />
Line 112: Line 129:
**[[6lyp]], [[6vxm]], [[6vxn]], [[6vxp]] – AtMsc-like (mutant) – Cryo EM<br />
**[[6lyp]], [[6vxm]], [[6vxn]], [[6vxp]] – AtMsc-like (mutant) – Cryo EM<br />
-
* Chloride channel
+
* Chloride channel or H(+)/Cl(-) exchange transporter ClcA or human proton-activated chloride channel PAC
**[[1rk4]], [[3swl]] - hClCh protein 1<br />
**[[1rk4]], [[3swl]] - hClCh protein 1<br />
Line 126: Line 143:
**[[6y2h]] - hClCh protein 5<br />
**[[6y2h]] - hClCh protein 5<br />
**[[2j9l]], [[2ja3]] - hClCh protein 5 + nucleotide<br />
**[[2j9l]], [[2ja3]] - hClCh protein 5 + nucleotide<br />
 +
**[[7bxu]], [[7cq6]] - hClCh protein 7 + OSTM1 – Cryo EM<br />
 +
**[[7cq7]] - hClCh protein 7 + OSTM1 + ADP – Cryo EM<br />
 +
**[[7cq5]], [[7jm7]] - hClCh protein 7 + OSTM1 + ATP – Cryo EM<br />
 +
**[[7jna]], [[7jnc]] - hClCh PAC – Cryo EM<br />
**[[5tr1]], [[5tqq]] - bCIC (mutant) + antibody – bovine - Cryo EM<br />
**[[5tr1]], [[5tqq]] - bCIC (mutant) + antibody – bovine - Cryo EM<br />
**[[6erz]], [[6ery]] - mClCh protein 6<br />
**[[6erz]], [[6ery]] - mClCh protein 6<br />
-
**[[1ots]] - EcERIC + antibody<br />
+
**[[7jm6]] - cClCh protein 7 + ATP – chicken - Cryo EM<br />
-
**[[1ott]], [[1otu]] - EcERIC (mutant) + antibody<br />
+
**[[6lsc]], [[6v2j]] - EcERIC (mutant) <br />
 +
**[[1ots]], [[6k5f]] - EcERIC + antibody<br />
 +
**[[1ott]], [[1otu]], [[6ad7]], [[6ad8]], [[6ada]], [[6adb]], [[6adc]], [[6k5a]], [[6k5d]], [[7cvs]], [[7cvt]] - EcERIC (mutant) + antibody<br />
**[[2d4z]] - TmClCh - ''Torpedo marmorata''<br />
**[[2d4z]] - TmClCh - ''Torpedo marmorata''<br />
**[[2yv9]] - CeClCh EXC-4 – ''Caenorhabditis elegans''<br />
**[[2yv9]] - CeClCh EXC-4 – ''Caenorhabditis elegans''<br />
**[[3rif]] - CeClCh + antibody + Glu + Ivermectin<br />
**[[3rif]] - CeClCh + antibody + Glu + Ivermectin<br />
 +
**[[7ji3]] - CICh – ''Takifugu bimaculatus'' - Cryo EM<br />
**[[5y7i]] - ClCh – ''Oreochromis mossabicus''<br />
**[[5y7i]] - ClCh – ''Oreochromis mossabicus''<br />
Line 144: Line 168:
**[[6djb]], [[5zsu]] – hVDAC1 subunit LRRC8A – Cryo EM<br />
**[[6djb]], [[5zsu]] – hVDAC1 subunit LRRC8A – Cryo EM<br />
**[[6m04]] – hVDAC1 subunit LRRC8AD (mutant) – Cryo EM<br />
**[[6m04]] – hVDAC1 subunit LRRC8AD (mutant) – Cryo EM<br />
 +
**[[7kuh]] – mVDAC – electron crystallography <br />
**[[3emn]], [[4c69]] – mVDAC1 <br />
**[[3emn]], [[4c69]] – mVDAC1 <br />
-
**[[6g9o]], [[6g9l]], [[6g8z]], [[6o00]], [[6nzz]], [[6nzw]] – mVDAC1 subunit LRRC8A – Cryo EM<br />
+
**[[6g9o]], [[6g9l]], [[6g8z]], [[6o00]], [[6nzz]], [[6nzw]], [[7m17]], [[7m19]] – mVDAC1 subunit LRRC8A – Cryo EM<br />
 +
**[[7p5v]], [[7p5w]], [[7p5y]], [[7p60]], [[7p6k]] – mVDAC1 subunit LRRC8A + nanobody – Cryo EM<br />
**[[6fnw]] – mVDAC1 subunit LRRC8A C terminal<br />
**[[6fnw]] – mVDAC1 subunit LRRC8A C terminal<br />
**[[4bum]] – zeVDAC2 – zebra fish<br />
**[[4bum]] – zeVDAC2 – zebra fish<br />
 +
**[[7en0]] – VDAC1 – ''Brachypodium distachyon'' – Cryo EM<br />
* Ligand-gated ion channel
* Ligand-gated ion channel

Revision as of 10:04, 7 October 2021

3D structures of ion channels

Updated on 07-October-2021

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman

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