3hji
From Proteopedia
(Difference between revisions)
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==1.8 Angstrom Crystal Structure of the I74V:I85V Variant of Vivid (VVD).== | ==1.8 Angstrom Crystal Structure of the I74V:I85V Variant of Vivid (VVD).== | ||
- | <StructureSection load='3hji' size='340' side='right' caption='[[3hji]], [[Resolution|resolution]] 1.80Å' scene=''> | + | <StructureSection load='3hji' size='340' side='right'caption='[[3hji]], [[Resolution|resolution]] 1.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3hji]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3hji]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Chrysonilia_crassa Chrysonilia crassa]. The March 2015 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Phototropin'' by David Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2015_3 10.2210/rcsb_pdb/mom_2015_3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HJI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HJI FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3hjk|3hjk]], [[2pd7|2pd7]], [[2pd8|2pd8]], [[2pdt|2pdt]], [[2pdr|2pdr]], [[3d72|3d72]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3hjk|3hjk]], [[2pd7|2pd7]], [[2pd8|2pd8]], [[2pdt|2pdt]], [[2pdr|2pdr]], [[3d72|3d72]]</div></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">G17A4.050, Vivid, vvd ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">G17A4.050, Vivid, vvd ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5141 Chrysonilia crassa])</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hji FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hji OCA], [https://pdbe.org/3hji PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hji RCSB], [https://www.ebi.ac.uk/pdbsum/3hji PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hji ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
- | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hj/3hji_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hj/3hji_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Chrysonilia crassa]] | [[Category: Chrysonilia crassa]] | ||
+ | [[Category: Large Structures]] | ||
[[Category: Phototropin]] | [[Category: Phototropin]] | ||
[[Category: RCSB PDB Molecule of the Month]] | [[Category: RCSB PDB Molecule of the Month]] |
Revision as of 12:00, 13 October 2021
1.8 Angstrom Crystal Structure of the I74V:I85V Variant of Vivid (VVD).
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