7d50

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==SpuA mutant - H221N with glutamyl-thioester==
==SpuA mutant - H221N with glutamyl-thioester==
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<StructureSection load='7d50' size='340' side='right'caption='[[7d50]]' scene=''>
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<StructureSection load='7d50' size='340' side='right'caption='[[7d50]], [[Resolution|resolution]] 1.77&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7D50 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7D50 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[7d50]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7D50 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7D50 FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7d50 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7d50 OCA], [https://pdbe.org/7d50 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7d50 RCSB], [https://www.ebi.ac.uk/pdbsum/7d50 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7d50 ProSAT]</span></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CYG:2-AMINO-4-(AMINO-3-OXO-PROPYLSULFANYLCARBONYL)-BUTYRIC+ACID'>CYG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7d50 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7d50 OCA], [https://pdbe.org/7d50 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7d50 RCSB], [https://www.ebi.ac.uk/pdbsum/7d50 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7d50 ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Polyamines are important regulators in all living organisms and are implicated in essential biological processes including cell growth, differentiation and apoptosis. Pseudomonas aeruginosa possesses an spuABCDEFGHI gene cluster that is involved in the metabolism and uptake of two polyamines: spermidine and putrescine. In the proposed gamma-glutamylation-putrescine metabolism pathway, SpuA hydrolyzes gamma-glutamyl-gamma-aminobutyrate (gamma-Glu-GABA) to glutamate and gamma-aminobutyric acid (GABA). In this study, crystal structures of P. aeruginosa SpuA are reported, confirming it to be a member of the class I glutamine amidotransferase (GAT) family. Activity and substrate-binding assays confirm that SpuA exhibits a preference for gamma-Glu-GABA as a substrate. Structures of an inactive H221N mutant were determined with bound glutamate thioester intermediate or glutamate product, thus delineating the active site and substrate-binding pocket and elucidating the catalytic mechanism. The crystal structure of another bacterial member of the class I GAT family from Mycolicibacterium smegmatis (MsGATase) in complex with glutamine was determined for comparison and reveals a binding site for glutamine. Activity assays confirm that MsGATase has activity for glutamine as a substrate but not for gamma-Glu-GABA. The work reported here provides a starting point for further investigation of polyamine metabolism in P. aeruginosa.
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Structure and mechanism of the gamma-glutamyl-gamma-aminobutyrate hydrolase SpuA from Pseudomonas aeruginosa.,Chen Y, Jia H, Zhang J, Liang Y, Liu R, Zhang Q, Bartlam M Acta Crystallogr D Struct Biol. 2021 Oct 1;77(Pt 10):1305-1316. doi:, 10.1107/S2059798321008986. Epub 2021 Sep 22. PMID:34605433<ref>PMID:34605433</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 7d50" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Bartlam M]]
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[[Category: Bartlam, M]]
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[[Category: Chen Y]]
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[[Category: Chen, Y]]
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[[Category: Zhang Q]]
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[[Category: Zhang, Q]]
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[[Category: Gama-glutamyl-gama-aminobutyrate hydrolase]]
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[[Category: Glutamine amidotransferase]]
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[[Category: Hydrolase]]
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[[Category: Pseudomonas aeruginosa pao1]]
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[[Category: Spua]]

Revision as of 12:50, 13 October 2021

SpuA mutant - H221N with glutamyl-thioester

PDB ID 7d50

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