7dbi

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==Crystal structure of the peroxisomal acyl-CoA hydrolase MpaH==
==Crystal structure of the peroxisomal acyl-CoA hydrolase MpaH==
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<StructureSection load='7dbi' size='340' side='right'caption='[[7dbi]]' scene=''>
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<StructureSection load='7dbi' size='340' side='right'caption='[[7dbi]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DBI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DBI FirstGlance]. <br>
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<table><tr><td colspan='2'>[[7dbi]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Cbs_257.29 Cbs 257.29]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7DBI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7DBI FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dbi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dbi OCA], [https://pdbe.org/7dbi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dbi RCSB], [https://www.ebi.ac.uk/pdbsum/7dbi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dbi ProSAT]</span></td></tr>
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MPA' ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5074 CBS 257.29])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7dbi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7dbi OCA], [https://pdbe.org/7dbi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7dbi RCSB], [https://www.ebi.ac.uk/pdbsum/7dbi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7dbi ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Mycophenolic acid (MPA) is a fungal natural product and first-line immunosuppressive drug for organ transplantations and autoimmune diseases. In the compartmentalized biosynthesis of MPA, the acyl-coenzyme A (CoA) hydrolase MpaH' located in peroxisomes catalyzes the highly specific hydrolysis of MPA-CoA to produce the final product MPA. The strict substrate specificity of MpaH' not only averts undesired hydrolysis of various cellular acyl-CoAs, but also prevents MPA-CoA from further peroxisomal beta-oxidation catabolism. To elucidate the structural basis for this important property, in this study, we solve the crystal structures of the substrate-free form of MpaH' and the MpaH'(S139A) mutant in complex with the product MPA. The MpaH' structure reveals a canonical alpha/beta-hydrolase fold with an unusually large cap domain and a rare location of the acidic residue D163 of catalytic triad after strand beta6. MpaH' also forms an atypical dimer with the unique C-terminal helices alpha13 and alpha14 arming the cap domain of the other protomer and indirectly participating in the substrate binding. With these characteristics, we propose that MpaH' and its homologs form a new subfamily of alpha/beta hydrolase fold protein. The crystal structure of MpaH'(S139A) /MPA complex and the modeled structure of MpaH'/MPA-CoA, together with the structure-guided mutagenesis analysis and isothermal titration calorimetry (ITC) measurements, provide important mechanistic insights into the high substrate specificity of MpaH'.
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Structural basis for substrate specificity of the peroxisomal acyl-CoA hydrolase MpaH' involved in mycophenolic acid biosynthesis.,You C, Li F, Zhang X, Ma L, Zhang YZ, Zhang W, Li S FEBS J. 2021 Apr 12. doi: 10.1111/febs.15874. PMID:33843134<ref>PMID:33843134</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 7dbi" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Cbs 257 29]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Li SY]]
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[[Category: Li, S Y]]
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[[Category: You C]]
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[[Category: You, C]]
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[[Category: Hydrolase]]
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[[Category: Mpa biosynthesis]]
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[[Category: Mpahss']]
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[[Category: Peroxisomal acyl-coa hydrolase]]

Revision as of 12:50, 13 October 2021

Crystal structure of the peroxisomal acyl-CoA hydrolase MpaH

PDB ID 7dbi

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