3cwz
From Proteopedia
(Difference between revisions)
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==Structure of RAB6(GTP)-R6IP1 complex== | ==Structure of RAB6(GTP)-R6IP1 complex== | ||
- | <StructureSection load='3cwz' size='340' side='right' caption='[[3cwz]], [[Resolution|resolution]] 3.20Å' scene=''> | + | <StructureSection load='3cwz' size='340' side='right'caption='[[3cwz]], [[Resolution|resolution]] 3.20Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3cwz]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3cwz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human] and [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CWZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CWZ FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3bbp|3bbp]], [[2gil|2gil]], [[1d5c|1d5c]], [[2dwk|2dwk]], [[1lox|1lox]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3bbp|3bbp]], [[2gil|2gil]], [[1d5c|1d5c]], [[2dwk|2dwk]], [[1lox|1lox]]</div></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RAB6A, RAB6 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RAB6A, RAB6 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN]), Rab6ip1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cwz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cwz OCA], [https://pdbe.org/3cwz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cwz RCSB], [https://www.ebi.ac.uk/pdbsum/3cwz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cwz ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [[ | + | [[https://www.uniprot.org/uniprot/RAB6A_HUMAN RAB6A_HUMAN]] Protein transport. Regulator of membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER). Has a low GTPase activity. [[https://www.uniprot.org/uniprot/DEN5A_MOUSE DEN5A_MOUSE]] Guanine nucleotide exchange factor (GEF) which may activate RAB6A and RAB39A and/or RAB39B. Promotes the exchange of GDP to GTP, converting inactive GDP-bound Rab proteins into their active GTP-bound form (By similarity). |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</div> | </div> | ||
<div class="pdbe-citations 3cwz" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 3cwz" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[Ras-related protein Rab 3D structures|Ras-related protein Rab 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Human]] | [[Category: Human]] | ||
+ | [[Category: Large Structures]] | ||
[[Category: Lk3 transgenic mice]] | [[Category: Lk3 transgenic mice]] | ||
[[Category: Goud, B]] | [[Category: Goud, B]] |
Revision as of 19:15, 20 October 2021
Structure of RAB6(GTP)-R6IP1 complex
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Categories: Human | Large Structures | Lk3 transgenic mice | Goud, B | Houdusse, A | Khan, A R | Recacha, R | Er-golgi transport | Golgi | Golgi apparatus | Gtp-binding | Guanosine 5' triphosphate | Lipase | Lipoprotein | Lipoxygenase | Membrane | Methylation | Nesca plat | Nucleotide-binding | Phosphoprotein | Prenylation | Protein transport | Rab small gtpase | Rab-binding domain | Rab6 interacting protein 1 | Rpip8 | Run | Transport | Transport protein | Unc-14