6zcc
From Proteopedia
(Difference between revisions)
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| - | ==X- | + | ==X-ray structure of the Haloalkane dehalogenase HOB (HaloTag7-based Oligonucleotide Binder) labeled with a chloroalkane-tetramethylrhodamine fluorophore substrate== |
| - | <StructureSection load='6zcc' size='340' side='right'caption='[[6zcc]]' scene=''> | + | <StructureSection load='6zcc' size='340' side='right'caption='[[6zcc]], [[Resolution|resolution]] 1.52Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ZCC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ZCC FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6zcc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhoso Rhoso]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ZCC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ZCC FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6zcc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6zcc OCA], [https://pdbe.org/6zcc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6zcc RCSB], [https://www.ebi.ac.uk/pdbsum/6zcc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6zcc ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=OEH:[9-[2-carboxy-5-[2-[2-(6-chloranylhexoxy)ethoxy]ethylcarbamoyl]phenyl]-6-(dimethylamino)xanthen-3-ylidene]-dimethyl-azanium'>OEH</scene></td></tr> |
| + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[6y7a|6y7a]], [[6y7b|6y7b]]</div></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dhaA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1831 RHOSO])</td></tr> | ||
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Haloalkane_dehalogenase Haloalkane dehalogenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.8.1.5 3.8.1.5] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6zcc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6zcc OCA], [https://pdbe.org/6zcc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6zcc RCSB], [https://www.ebi.ac.uk/pdbsum/6zcc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6zcc ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Dehalogenase 3D structures|Dehalogenase 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Haloalkane dehalogenase]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Hiblot J]] | + | [[Category: Rhoso]] |
| - | [[Category: Johnsson K]] | + | [[Category: Hiblot, J]] |
| - | [[Category: Tarnawski M]] | + | [[Category: Johnsson, K]] |
| + | [[Category: Tarnawski, M]] | ||
| + | [[Category: Halo]] | ||
| + | [[Category: Halotag7]] | ||
| + | [[Category: Hydrolase]] | ||
| + | [[Category: Oligonucleotide binder]] | ||
| + | [[Category: Self-labeling protein]] | ||
| + | [[Category: Tag]] | ||
| + | [[Category: Tetramethylrhodamine]] | ||
Revision as of 15:49, 27 October 2021
X-ray structure of the Haloalkane dehalogenase HOB (HaloTag7-based Oligonucleotide Binder) labeled with a chloroalkane-tetramethylrhodamine fluorophore substrate
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