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3h3x
From Proteopedia
(Difference between revisions)
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==Structure of the V74M large subunit mutant of NI-FE hydrogenase in an oxidized state== | ==Structure of the V74M large subunit mutant of NI-FE hydrogenase in an oxidized state== | ||
| - | <StructureSection load='3h3x' size='340' side='right' caption='[[3h3x]], [[Resolution|resolution]] 2.70Å' scene=''> | + | <StructureSection load='3h3x' size='340' side='right'caption='[[3h3x]], [[Resolution|resolution]] 2.70Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3h3x]] is a 6 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3h3x]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_49200 Atcc 49200]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H3X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H3X FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=F3S:FE3-S4+CLUSTER'>F3S</scene>, <scene name='pdbligand=FCO:CARBONMONOXIDE-(DICYANO)+IRON'>FCO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=F3S:FE3-S4+CLUSTER'>F3S</scene>, <scene name='pdbligand=FCO:CARBONMONOXIDE-(DICYANO)+IRON'>FCO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1frf|1frf]], [[1yrq|1yrq]], [[3cur|3cur]], [[3cus|3cus]], [[1yqw|1yqw]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1frf|1frf]], [[1yrq|1yrq]], [[3cur|3cur]], [[3cus|3cus]], [[1yqw|1yqw]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hydA ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hydA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=878 ATCC 49200]), hydB ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=878 ATCC 49200])</td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Cytochrome-c3_hydrogenase Cytochrome-c3 hydrogenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.12.2.1 1.12.2.1] </span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h3x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h3x OCA], [https://pdbe.org/3h3x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h3x RCSB], [https://www.ebi.ac.uk/pdbsum/3h3x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h3x ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/PHNS_DESFR PHNS_DESFR]] Involved in hydrogen uptake for the anaerobic reduction of sulfate to hydrogen sulfide in an electron transport chain. Cytochrome c3 is the physiological electron acceptor. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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[[Category: Atcc 49200]] | [[Category: Atcc 49200]] | ||
[[Category: Cytochrome-c3 hydrogenase]] | [[Category: Cytochrome-c3 hydrogenase]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Fontecilla-Camps, J C]] | [[Category: Fontecilla-Camps, J C]] | ||
[[Category: Martin, L]] | [[Category: Martin, L]] | ||
Revision as of 07:43, 10 November 2021
Structure of the V74M large subunit mutant of NI-FE hydrogenase in an oxidized state
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