7nxq

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==Structure of the pentameric C-terminal domain of the capsid protein from Kaposi's sarcoma-associated herpesvirus (KSHV)==
==Structure of the pentameric C-terminal domain of the capsid protein from Kaposi's sarcoma-associated herpesvirus (KSHV)==
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<StructureSection load='7nxq' size='340' side='right'caption='[[7nxq]]' scene=''>
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<StructureSection load='7nxq' size='340' side='right'caption='[[7nxq]], [[Resolution|resolution]] 2.42&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7NXQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7NXQ FirstGlance]. <br>
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<table><tr><td colspan='2'>[[7nxq]] is a 10 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7NXQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7NXQ FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7nxq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7nxq OCA], [https://pdbe.org/7nxq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7nxq RCSB], [https://www.ebi.ac.uk/pdbsum/7nxq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7nxq ProSAT]</span></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[7nxp|7nxp]]</div></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7nxq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7nxq OCA], [https://pdbe.org/7nxq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7nxq RCSB], [https://www.ebi.ac.uk/pdbsum/7nxq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7nxq ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[[https://www.uniprot.org/uniprot/Q76RI7_HHV8 Q76RI7_HHV8]] Capsid vertex-specific component that plays a role during viral DNA encapsidation, assuring correct genome cleavage and presumably stabilizing capsids that contain full-length viral genomes. Participates in the interaction between the capsid and the tegument through interaction with the large tegument protein/LTP.[HAMAP-Rule:MF_04025]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Herpesviruses cause severe diseases particularly in immunocompromised patients. Both genome packaging and release from the capsid require a unique portal channel occupying one of the 12 capsid vertices. Here, we report the 2.6 A crystal structure of the pentameric pORF19 of the gamma-herpesvirus Kaposi's sarcoma-associated herpesvirus (KSHV) resembling the portal cap that seals this portal channel. We also present the structure of its beta-herpesviral ortholog, revealing a striking structural similarity to its alpha- and gamma-herpesviral counterparts despite apparent differences in capsid association. We demonstrate pORF19 pentamer formation in solution and provide insights into how pentamerization is triggered in infected cells. Mutagenesis in its lateral interfaces blocked pORF19 pentamerization and severely affected KSHV capsid assembly and production of infectious progeny. Our results pave the way to better understand the role of pORF19 in capsid assembly and identify a potential novel drug target for the treatment of herpesvirus-induced diseases.
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Assembly of infectious Kaposi's sarcoma-associated herpesvirus progeny requires formation of a pORF19 pentamer.,Naniima P, Naimo E, Koch S, Curth U, Alkharsah KR, Stroh LJ, Binz A, Beneke JM, Vollmer B, Boning H, Borst EM, Desai P, Bohne J, Messerle M, Bauerfeind R, Legrand P, Sodeik B, Schulz TF, Krey T PLoS Biol. 2021 Nov 4;19(11):e3001423. doi: 10.1371/journal.pbio.3001423., eCollection 2021 Nov. PMID:34735435<ref>PMID:34735435</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 7nxq" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Krey T]]
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[[Category: Krey, T]]
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[[Category: Legrand P]]
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[[Category: Legrand, P]]
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[[Category: Naniima P]]
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[[Category: Naniima, P]]
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[[Category: Assembly]]
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[[Category: Capsid]]
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[[Category: Herpesvirus]]
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[[Category: Kshv]]
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[[Category: Viral protein]]

Revision as of 14:16, 17 November 2021

Structure of the pentameric C-terminal domain of the capsid protein from Kaposi's sarcoma-associated herpesvirus (KSHV)

PDB ID 7nxq

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