7oml
From Proteopedia
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| ==Bacillus subtilis phosphoglucomutase GlmM (metal bound)== | ==Bacillus subtilis phosphoglucomutase GlmM (metal bound)== | ||
| - | <StructureSection load='7oml' size='340' side='right'caption='[[7oml]]' scene=''> | + | <StructureSection load='7oml' size='340' side='right'caption='[[7oml]], [[Resolution|resolution]] 2.90Å' scene=''> | 
| == Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7OML OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7OML FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7oml]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7OML OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7OML FirstGlance]. <br> | 
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7oml FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7oml OCA], [https://pdbe.org/7oml PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7oml RCSB], [https://www.ebi.ac.uk/pdbsum/7oml PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7oml ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | 
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Phosphoglucosamine_mutase Phosphoglucosamine mutase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.4.2.10 5.4.2.10] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7oml FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7oml OCA], [https://pdbe.org/7oml PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7oml RCSB], [https://www.ebi.ac.uk/pdbsum/7oml PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7oml ProSAT]</span></td></tr> | ||
| </table> | </table> | ||
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/GLMM_BACSU GLMM_BACSU]] Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate (By similarity). Glucosamine-1-phosphate is used for cell wall biosynthesis (Probable).[HAMAP-Rule:MF_01554]<ref>PMID:26240071</ref>   | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Cyclic-di-adenosine monophosphate (c-di-AMP) is an important nucleotide signaling molecule that plays a key role in osmotic regulation in bacteria. c-di-AMP is produced from two molecules of ATP by proteins containing a diadenylate cyclase (DAC) domain. In Bacillus subtilis, the main c-di-AMP cyclase, CdaA, is a membrane-linked cyclase with an N-terminal transmembrane domain followed by the cytoplasmic DAC domain. As both high and low levels of c-di-AMP have a negative impact on bacterial growth, the cellular levels of this signaling nucleotide are tightly regulated. Here we investigated how the activity of the B. subtilis CdaA is regulated by the phosphoglucomutase GlmM, which has been shown to interact with the c-di-AMP cyclase. Using the soluble B. subtilis CdaACD catalytic domain and purified full-length GlmM or the GlmMF369 variant lacking the C-terminal flexible domain 4, we show that the cyclase and phosphoglucomutase form a stable complex in vitro and that GlmM is a potent cyclase inhibitor. We determined the crystal structure of the individual B. subtilis CdaACD and GlmM homodimers and of the CdaACD:GlmMF369 complex. In the complex structure, a CdaACD dimer is bound to a GlmMF369 dimer in such a manner that GlmM blocks the oligomerization of CdaACD and formation of active head-to-head cyclase oligomers, thus suggesting a mechanism by which GlmM acts as a cyclase inhibitor. As the amino acids at the CdaACD:GlmM interphase are conserved, we propose that the observed mechanism of inhibition of CdaA by GlmM may also be conserved among Firmicutes. | ||
| + | |||
| + | Structural basis for the inhibition of the Bacillus subtilis c-di-AMP cyclase CdaA by the phosphoglucomutase GlmM.,Pathania M, Tosi T, Millership C, Hoshiga F, Morgan RML, Freemont PS, Grundling A J Biol Chem. 2021 Oct 20;297(5):101317. doi: 10.1016/j.jbc.2021.101317. PMID:34678313<ref>PMID:34678313</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 7oml" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| __TOC__ | __TOC__ | ||
| </StructureSection> | </StructureSection> | ||
| [[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Freemont P]] | + | [[Category: Phosphoglucosamine mutase]] | 
| - | [[Category: Grundling  | + | [[Category: Freemont, P]] | 
| - | [[Category: Pathania M]] | + | [[Category: Grundling, A G]] | 
| + | [[Category: Pathania, M]] | ||
| + | [[Category: C-di-amp]] | ||
| + | [[Category: Diadenylate cyclase]] | ||
| + | [[Category: Glucosamine-1-phosphate]] | ||
| + | [[Category: Glucosamine-6-phosphate]] | ||
| + | [[Category: Isomerase]] | ||
| + | [[Category: Metal-bound protein]] | ||
Revision as of 14:17, 17 November 2021
Bacillus subtilis phosphoglucomutase GlmM (metal bound)
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