7mgk
From Proteopedia
(Difference between revisions)
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==TNNI3K complexed with 1-(3,5-dichloro-4-((6-(methylamino)pyrimidin-4-yl)oxy)phenyl)-3-(3-(trifluoromethyl)phenyl)urea== | ==TNNI3K complexed with 1-(3,5-dichloro-4-((6-(methylamino)pyrimidin-4-yl)oxy)phenyl)-3-(3-(trifluoromethyl)phenyl)urea== | ||
- | <StructureSection load='7mgk' size='340' side='right'caption='[[7mgk]]' scene=''> | + | <StructureSection load='7mgk' size='340' side='right'caption='[[7mgk]], [[Resolution|resolution]] 3.10Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7MGK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7MGK FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7mgk]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7MGK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7MGK FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7mgk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7mgk OCA], [https://pdbe.org/7mgk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7mgk RCSB], [https://www.ebi.ac.uk/pdbsum/7mgk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7mgk ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZGD:N-(3,5-dichloro-4-{[6-(methylamino)pyrimidin-4-yl]oxy}phenyl)-N-[3-(trifluoromethyl)phenyl]urea'>ZGD</scene></td></tr> |
+ | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Non-specific_serine/threonine_protein_kinase Non-specific serine/threonine protein kinase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.1 2.7.11.1] </span></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7mgk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7mgk OCA], [https://pdbe.org/7mgk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7mgk RCSB], [https://www.ebi.ac.uk/pdbsum/7mgk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7mgk ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Disease == | ||
+ | [[https://www.uniprot.org/uniprot/TNI3K_HUMAN TNI3K_HUMAN]] The disease is caused by mutations affecting the gene represented in this entry. | ||
+ | == Function == | ||
+ | [[https://www.uniprot.org/uniprot/TNI3K_HUMAN TNI3K_HUMAN]] May play a role in cardiac physiology.<ref>PMID:12721663</ref> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | A series of diarylurea inhibitors of the cardiac-specific kinase TNNI3K were developed to elucidate the biological function of TNNI3K and evaluate TNNI3K as a therapeutic target for the treatment of cardiovascular diseases. Utilizing a structure-based design, enhancements in kinase selectivity were engineered into the series, capitalizing on the established X-ray crystal structures of TNNI3K, VEGFR2, p38alpha, and B-Raf. Our efforts culminated in the discovery of an in vivo tool compound 47 (GSK329), which exhibited desirable TNNI3K potency and rat pharmacokinetic properties as well as promising kinase selectivity against VEGFR2 (40-fold), p38alpha (80-fold), and B-Raf (>200-fold). Compound 47 demonstrated positive cardioprotective outcomes in a mouse model of ischemia/reperfusion cardiac injury, indicating that optimized exemplars from this series, such as 47, are favorable leads for discovering novel medicines for cardiac diseases. | ||
+ | |||
+ | Identification of Diarylurea Inhibitors of the Cardiac-Specific Kinase TNNI3K by Designing Selectivity Against VEGFR2, p38alpha, and B-Raf.,Patterson JR, Graves AP, Stoy P, Cheung M, Desai TA, Fries H, Gatto GJ Jr, Holt DA, Shewchuk L, Totoritis R, Wang L, Kallander LS J Med Chem. 2021 Oct 26. doi: 10.1021/acs.jmedchem.1c00700. PMID:34699203<ref>PMID:34699203</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7mgk" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Shewchuk | + | [[Category: Non-specific serine/threonine protein kinase]] |
+ | [[Category: Shewchuk, L M]] | ||
+ | [[Category: Cark]] | ||
+ | [[Category: Kinase]] | ||
+ | [[Category: Transferase]] | ||
+ | [[Category: Transferase-inhibitor complex]] |
Revision as of 12:46, 24 November 2021
TNNI3K complexed with 1-(3,5-dichloro-4-((6-(methylamino)pyrimidin-4-yl)oxy)phenyl)-3-(3-(trifluoromethyl)phenyl)urea
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