Fel d 1
From Proteopedia
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Chain 1 has about 8kDa, composed of a residue of 70 amino acids and chain 2 has about 10 kDa, which can be composed of a residue of 90 amino acids, found preferably in the sebaceous glands, or composed of a residue of 92 amino acids, which is expressed by the salivary glands. Its glycan portion is found in chain 2 and the recombinant structure of Fel d 1 reveals that the N33 residue is located in the loop connecting the H2 and H3 helices and that the side chain is exposed to the solvent<ref name="[1]"/><ref name="[4]"/>. | Chain 1 has about 8kDa, composed of a residue of 70 amino acids and chain 2 has about 10 kDa, which can be composed of a residue of 90 amino acids, found preferably in the sebaceous glands, or composed of a residue of 92 amino acids, which is expressed by the salivary glands. Its glycan portion is found in chain 2 and the recombinant structure of Fel d 1 reveals that the N33 residue is located in the loop connecting the H2 and H3 helices and that the side chain is exposed to the solvent<ref name="[1]"/><ref name="[4]"/>. | ||
| - | Figure 1 shows the general structure of a Fel d 1 monomer, shown in two different orientations, rotated 90° around the vertical axis. Chains 1 and 2 correspond to the gold and blue helices respectively. The dotted line indicates the disordered loop (residues 75 to 92). The three disulfide bridges connecting chains 1 and 2 are shown in green. An arrow indicates the unique glycosylation site at residue N33<ref name="[1]"/>.[ | + | [[Image:Monomero.png | thumb | '''Figure 1.'''General structure of a Fel d 1 monomer, shown in two distinct orientations, rotated 90° about the vertical axis.]]Figure 1 shows the general structure of a Fel d 1 monomer, shown in two different orientations, rotated 90° around the vertical axis. Chains 1 and 2 correspond to the gold and blue helices respectively. The dotted line indicates the disordered loop (residues 75 to 92). The three disulfide bridges connecting chains 1 and 2 are shown in green. An arrow indicates the unique glycosylation site at residue N33<ref name="[1]"/>. |
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| + | In the Fel d 1 tetramer, three Ca<sup>2+</sup> binding sites were identified [4], as in Figure 2, where the Ca<sup>2+</sup> are indicated as red balls. Two Ca<sup>2+</sup> binding sites are equivalent and are found symmetrically located on either side of the dimer and the third is found within the dimerization interface (Figure 2 (a) and (b)). The equivalent Ca<sup>2+</sup> binds to the carbonyl groups of residues Asp46 and Met49, as well as to four and three water molecules in the A and B subunits, respectively (Figure 2 (c)) and the Ca<sup>2+</sup> located at the dimerization interface binds to the OD1 atoms of residues Asn89 (in subunit A), Asn89 (B) and Asp130 (B), as well as to the carbonyl group of residue Ile125 (A) and three molecules of water (Figure 2 (d))<ref name="[2]">KAISER, Liselotte; VELICKOVIC, Tanja Cirkovic; BADIA-MARTINEZ, Daniel; ADEDOYIN, Justus; THUNBERG, Sarah; HALLÉN, Dan; BERNDT, Kurt; GRÖNLUND, Hans; GAFVELIN, Guro; HAGE, Marianne van; ACHOUR, Adnane. Structural Characterization of the Tetrameric form of the Major Cat Allergen Fel d 1. Journal of Molecular Biology, [s. l.], v. 370, ed. 4, p. 714-727, 2007. doi: https://doi.org/10.1016/j.jmb.2007.04.074.</ref>. | ||
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== '''References''' == | == '''References''' == | ||
<references/> | <references/> | ||
Revision as of 00:38, 3 December 2021
1PUO - Fel d 1: The major cat allergen
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