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2zl2
From Proteopedia
(Difference between revisions)
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==Crystal structure of H.pylori ClpP in complex with the peptide NVLGFTQ== | ==Crystal structure of H.pylori ClpP in complex with the peptide NVLGFTQ== | ||
| - | <StructureSection load='2zl2' size='340' side='right' caption='[[2zl2]], [[Resolution|resolution]] 2.50Å' scene=''> | + | <StructureSection load='2zl2' size='340' side='right'caption='[[2zl2]], [[Resolution|resolution]] 2.50Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2zl2]] is a 24 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2zl2]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43504 Atcc 43504]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZL2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZL2 FirstGlance]. <br> |
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr> | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr> | ||
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2zl0|2zl0]], [[2zl3|2zl3]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2zl0|2zl0]], [[2zl3|2zl3]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">clpP ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">clpP ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=210 ATCC 43504])</td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Endopeptidase_Clp Endopeptidase Clp], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.92 3.4.21.92] </span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zl2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zl2 OCA], [https://pdbe.org/2zl2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zl2 RCSB], [https://www.ebi.ac.uk/pdbsum/2zl2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zl2 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/CLPP_HELPY CLPP_HELPY]] Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 33: | Line 33: | ||
==See Also== | ==See Also== | ||
| - | *[[Clp | + | *[[Clp protease 3D structures|Clp protease 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
| Line 40: | Line 40: | ||
[[Category: Atcc 43504]] | [[Category: Atcc 43504]] | ||
[[Category: Endopeptidase Clp]] | [[Category: Endopeptidase Clp]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Kim, D Y]] | [[Category: Kim, D Y]] | ||
[[Category: Kim, K K]] | [[Category: Kim, K K]] | ||
Revision as of 17:32, 15 December 2021
Crystal structure of H.pylori ClpP in complex with the peptide NVLGFTQ
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