7ebd
From Proteopedia
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==Bacterial STING in complex with c-di-GMP== | ==Bacterial STING in complex with c-di-GMP== | ||
| - | <StructureSection load='7ebd' size='340' side='right'caption='[[7ebd]]' scene=''> | + | <StructureSection load='7ebd' size='340' side='right'caption='[[7ebd]], [[Resolution|resolution]] 2.25Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7EBD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7EBD FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7ebd]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7EBD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7EBD FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ebd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ebd OCA], [https://pdbe.org/7ebd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ebd RCSB], [https://www.ebi.ac.uk/pdbsum/7ebd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ebd ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=C2E:9,9-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d 3,2-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)'>C2E</scene></td></tr> |
| + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ebd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ebd OCA], [https://pdbe.org/7ebd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ebd RCSB], [https://www.ebi.ac.uk/pdbsum/7ebd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ebd ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Mammalian innate immune sensor STING (STimulator of INterferon Gene) was recently found to originate from bacteria. During phage infection, bacterial STING sense c-di-GMP generated by the CD-NTase (cGAS/DncV-like nucleotidyltransferase) encoded in the same operon and signal suicide commitment as a defense strategy that restricts phage propagation. However, the precise binding mode of c-di-GMP to bacterial STING and the specific recognition mechanism are still elusive. Here, we determine two complex crystal structures of bacterial STING/c-di-GMP, which provide a clear picture of how c-di-GMP is distinguished from other cyclic dinucleotides. The protein-protein interactions further reveal the driving force behind filament formation of bacterial STING. Finally, we group the bacterial STING into two classes based on the conserved motif in beta-strand lid, which dictate their ligand specificity and oligomerization mechanism, and propose an evolution-based model that describes the transition from c-di-GMP-dependent signaling in bacteria to 2'3'-cGAMP-dependent signaling in eukaryotes. | ||
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| + | Crystal structure and functional implication of bacterial STING.,Ko TP, Wang YC, Yang CS, Hou MH, Chen CJ, Chiu YF, Chen Y Nat Commun. 2022 Jan 10;13(1):26. doi: 10.1038/s41467-021-26583-3. PMID:35013136<ref>PMID:35013136</ref> | ||
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| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 7ebd" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Chen Y]] | + | [[Category: Chen, Y]] |
| - | [[Category: Hou M | + | [[Category: Hou, M H]] |
| - | [[Category: Ko T | + | [[Category: Ko, T P]] |
| - | [[Category: Wang Y | + | [[Category: Wang, Y C]] |
| - | [[Category: Yang C | + | [[Category: Yang, C S]] |
| + | [[Category: Antiviral pathway]] | ||
| + | [[Category: Complex]] | ||
| + | [[Category: Cyclic dinucleotide]] | ||
| + | [[Category: Second messenger]] | ||
| + | [[Category: Signaling protein]] | ||
Revision as of 07:37, 19 January 2022
Bacterial STING in complex with c-di-GMP
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