3c5m
From Proteopedia
(Difference between revisions)
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==Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199== | ==Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199== | ||
| - | <StructureSection load='3c5m' size='340' side='right' caption='[[3c5m]], [[Resolution|resolution]] 2.60Å' scene=''> | + | <StructureSection load='3c5m' size='340' side='right'caption='[[3c5m]], [[Resolution|resolution]] 2.60Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3c5m]] is a 3 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3c5m]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibpa Vibpa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C5M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C5M FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr> |
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VPA0088 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VPA0088 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223926 VIBPA])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c5m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c5m OCA], [https://pdbe.org/3c5m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c5m RCSB], [https://www.ebi.ac.uk/pdbsum/3c5m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c5m ProSAT], [https://www.topsan.org/Proteins/NESGC/3c5m TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Vibpa]] | [[Category: Vibpa]] | ||
[[Category: Abashidze, M]] | [[Category: Abashidze, M]] | ||
Revision as of 07:44, 27 January 2022
Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199
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Categories: Large Structures | Vibpa | Abashidze, M | Acton, T B | Baran, M C | Forouhar, F | Hunt, J F | Janjua, H | Mao, L | Montelione, G T | Structural genomic | Owens, L A | Seetharaman, J | Tong, L | Wang, D | Xiao, R | Blade-shaped beta-propeller | Lyase | Nesg | PSI, Protein structure initiative
