3dbm
From Proteopedia
(Difference between revisions)
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==Crystal Structure of Allene oxide synthase== | ==Crystal Structure of Allene oxide synthase== | ||
- | <StructureSection load='3dbm' size='340' side='right' caption='[[3dbm]], [[Resolution|resolution]] 2.60Å' scene=''> | + | <StructureSection load='3dbm' size='340' side='right'caption='[[3dbm]], [[Resolution|resolution]] 2.60Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3dbm]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3dbm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Guayule_rubber_plant Guayule rubber plant]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DBM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DBM FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=HO2:(9E,11E,13S)-13-HYDROXYOCTADECA-9,11-DIENOIC+ACID'>HO2</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=HO2:(9E,11E,13S)-13-HYDROXYOCTADECA-9,11-DIENOIC+ACID'>HO2</scene></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3dam|3dam]], [[3dan|3dan]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3dam|3dam]], [[3dan|3dan]]</div></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CYP74A2, RPP30 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CYP74A2, RPP30 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=35935 Guayule rubber plant])</td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Hydroperoxide_dehydratase Hydroperoxide dehydratase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.92 4.2.1.92] </span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dbm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dbm OCA], [https://pdbe.org/3dbm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dbm RCSB], [https://www.ebi.ac.uk/pdbsum/3dbm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dbm ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [[ | + | [[https://www.uniprot.org/uniprot/C74A2_PARAR C74A2_PARAR]] Involved in the biosynthesis of jasmonic acid, a growth regulator that is implicated also as a signaling molecule in plant defense. Acts on a number of unsaturated fatty-acid hydroperoxides, forming the corresponding allene oxides (By similarity). |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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==See Also== | ==See Also== | ||
- | *[[Cytochrome P450|Cytochrome P450]] | + | *[[Cytochrome P450 3D structures|Cytochrome P450 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
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[[Category: Guayule rubber plant]] | [[Category: Guayule rubber plant]] | ||
[[Category: Hydroperoxide dehydratase]] | [[Category: Hydroperoxide dehydratase]] | ||
+ | [[Category: Large Structures]] | ||
[[Category: Li, L]] | [[Category: Li, L]] | ||
[[Category: Wang, X]] | [[Category: Wang, X]] |
Revision as of 07:59, 2 February 2022
Crystal Structure of Allene oxide synthase
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