SARS-CoV-2 protein ORF10
From Proteopedia
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<StructureSection load='' size='340' side='right' caption='Caption for this structure' scene='84/842075/Orf10/2'> | <StructureSection load='' size='340' side='right' caption='Caption for this structure' scene='84/842075/Orf10/2'> | ||
{{Theoretical_model}} {{Template:ModelConfidence}} | {{Theoretical_model}} {{Template:ModelConfidence}} | ||
| - | To the right is an '''[[AlphaFold]]2''' 3D model of SARS CoV-2 Protein ORF10 color coded by the pLDDT scores. It corresponds to the highest ranked model in terms of the pLDDT confidence scores, ''i.e.'', model 3<ref name="MIT_ColabFold">[https://colab.research.google.com/github/sokrypton/ColabFold/blob/main/beta/AlphaFold2_advanced.ipynb MIT ColabFold]</ref>. | + | To the right is an '''[[AlphaFold]]2''' 3D model of SARS CoV-2 Protein ORF10 (length=38 amino acids, UniProt ID A0A663DJA2 [https://proteopedia.org/wiki/index.php/SARS-CoV-2_protein_ORF10 UniProt ID A0A663DJA2])color coded by the pLDDT scores. It corresponds to the highest ranked model in terms of the pLDDT confidence scores, ''i.e.'', model 3<ref name="MIT_ColabFold">[https://colab.research.google.com/github/sokrypton/ColabFold/blob/main/beta/AlphaFold2_advanced.ipynb MIT ColabFold]</ref>. |
== Function == | == Function == | ||
'''Open Reading Frame 10 (ORF10)''' | '''Open Reading Frame 10 (ORF10)''' | ||
Revision as of 07:04, 8 February 2022
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References
- ↑ 1.0 1.1 1.2 MIT ColabFold
- ↑ Modeling of the SARS-COV-2 Genome
- ↑ Zhang C, Zheng W, Huang X, Bell EW, Zhou X, Zhang Y. Protein Structure and Sequence Reanalysis of 2019-nCoV Genome Refutes Snakes as Its Intermediate Host and the Unique Similarity between Its Spike Protein Insertions and HIV-1. J Proteome Res. 2020 Apr 3;19(4):1351-1360. doi: 10.1021/acs.jproteome.0c00129., Epub 2020 Mar 24. PMID:32200634 doi:http://dx.doi.org/10.1021/acs.jproteome.0c00129
