7r9p
From Proteopedia
(Difference between revisions)
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==Crystal structure of HPK1 in complex with compound 14== | ==Crystal structure of HPK1 in complex with compound 14== | ||
- | <StructureSection load='7r9p' size='340' side='right'caption='[[7r9p]]' scene=''> | + | <StructureSection load='7r9p' size='340' side='right'caption='[[7r9p]], [[Resolution|resolution]] 2.27Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7R9P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7R9P FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7r9p]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7R9P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7R9P FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7r9p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7r9p OCA], [https://pdbe.org/7r9p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7r9p RCSB], [https://www.ebi.ac.uk/pdbsum/7r9p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7r9p ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2WI:6-amino-2-fluoro-N,N-dimethyl-3-(4-methylspiro[cyclopropane-1,3-pyrrolo[2,3-b]pyridin]-5-yl)benzamide'>2WI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
+ | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Non-specific_serine/threonine_protein_kinase Non-specific serine/threonine protein kinase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.11.1 2.7.11.1] </span></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7r9p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7r9p OCA], [https://pdbe.org/7r9p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7r9p RCSB], [https://www.ebi.ac.uk/pdbsum/7r9p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7r9p ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [[https://www.uniprot.org/uniprot/M4K1_HUMAN M4K1_HUMAN]] Serine/threonine-protein kinase, which may play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway. May play a role in hematopoietic lineage decisions and growth regulation. Able to autophosphorylate.<ref>PMID:24362026</ref> <ref>PMID:8824585</ref> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Hematopoietic progenitor kinase 1 (HPK1) is implicated as a negative regulator of T-cell receptor-induced T-cell activation. Studies using HPK1 kinase-dead knock-in animals have demonstrated the loss of HPK1 kinase activity resulted in an increase in T-cell function and tumor growth inhibition in glioma models. Herein, we describe the discovery of a series of small molecule inhibitors of HPK1. Using a structure-based drug design approach, the kinase selectivity of the molecules was significantly improved by inducing and stabilizing an unusual P-loop folded binding mode. The metabolic liabilities of the initial 7-azaindole high-throughput screening hit were mitigated by addressing a key metabolic soft spot along with physicochemical property-based optimization. The resulting spiro-azaindoline HPK1 inhibitors demonstrated improved in vitro ADME properties and the ability to induce cytokine production in primary human T-cells. | ||
+ | |||
+ | Discovery of Spiro-azaindoline Inhibitors of Hematopoietic Progenitor Kinase 1 (HPK1).,Chan BK, Seward E, Lainchbury M, Brewer TF, An L, Blench T, Cartwright MW, Chan GKY, Choo EF, Drummond J, Elliott RL, Gancia E, Gazzard L, Hu B, Jones GE, Luo X, Madin A, Malhotra S, Moffat JG, Pang J, Salphati L, Sneeringer CJ, Stivala CE, Wei B, Wang W, Wu P, Heffron TP ACS Med Chem Lett. 2021 Dec 8;13(1):84-91. doi: 10.1021/acsmedchemlett.1c00473., eCollection 2022 Jan 13. PMID:35059127<ref>PMID:35059127</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7r9p" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Lehoux I]] | + | [[Category: Non-specific serine/threonine protein kinase]] |
- | [[Category: Wang W]] | + | [[Category: Lehoux, I]] |
- | [[Category: Wu P]] | + | [[Category: Wang, W]] |
+ | [[Category: Wu, P]] | ||
+ | [[Category: Inhibitor]] | ||
+ | [[Category: Kinase]] | ||
+ | [[Category: Map4k1]] | ||
+ | [[Category: Transferase-transferase inhibitor complex]] |
Revision as of 07:37, 9 February 2022
Crystal structure of HPK1 in complex with compound 14
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