3dnx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:03, 9 February 2022) (edit) (undo)
 
Line 1: Line 1:
==SPO1766 protein of unknown function from Silicibacter pomeroyi.==
==SPO1766 protein of unknown function from Silicibacter pomeroyi.==
-
<StructureSection load='3dnx' size='340' side='right' caption='[[3dnx]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
+
<StructureSection load='3dnx' size='340' side='right'caption='[[3dnx]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3dnx]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_700808 Atcc 700808]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DNX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3dnx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_700808 Atcc 700808]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DNX FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SPO1766 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=89184 ATCC 700808])</td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SPO1766 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=89184 ATCC 700808])</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dnx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dnx OCA], [http://pdbe.org/3dnx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3dnx RCSB], [http://www.ebi.ac.uk/pdbsum/3dnx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3dnx ProSAT], [http://www.topsan.org/Proteins/MCSG/3dnx TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dnx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dnx OCA], [https://pdbe.org/3dnx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dnx RCSB], [https://www.ebi.ac.uk/pdbsum/3dnx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dnx ProSAT], [https://www.topsan.org/Proteins/MCSG/3dnx TOPSAN]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 13: Line 13:
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dn/3dnx_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dn/3dnx_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 22: Line 22:
</StructureSection>
</StructureSection>
[[Category: Atcc 700808]]
[[Category: Atcc 700808]]
 +
[[Category: Large Structures]]
[[Category: Clancy, S]]
[[Category: Clancy, S]]
[[Category: Joachimiak, A]]
[[Category: Joachimiak, A]]

Current revision

SPO1766 protein of unknown function from Silicibacter pomeroyi.

PDB ID 3dnx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools