This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3g12

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Crystal structure of a putative lactoylglutathione lyase from Bdellovibrio bacteriovorus==
==Crystal structure of a putative lactoylglutathione lyase from Bdellovibrio bacteriovorus==
-
<StructureSection load='3g12' size='340' side='right' caption='[[3g12]], [[Resolution|resolution]] 2.58&Aring;' scene=''>
+
<StructureSection load='3g12' size='340' side='right'caption='[[3g12]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3g12]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bdeba Bdeba]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G12 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3G12 FirstGlance]. <br>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3G12 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3G12 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3g12 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g12 OCA], [https://pdbe.org/3g12 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3g12 RCSB], [https://www.ebi.ac.uk/pdbsum/3g12 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3g12 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3g12 TOPSAN]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Bd2520 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=264462 BDEBA])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3g12 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3g12 OCA], [http://pdbe.org/3g12 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3g12 RCSB], [http://www.ebi.ac.uk/pdbsum/3g12 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3g12 ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3g12 TOPSAN]</span></td></tr>
+
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
Line 12: Line 10:
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g1/3g12_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g1/3g12_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 20: Line 18:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bdeba]]
+
[[Category: Large Structures]]
-
[[Category: Almo, S C]]
+
[[Category: Almo SC]]
-
[[Category: Burley, S K]]
+
[[Category: Burley SK]]
-
[[Category: Chang, S]]
+
[[Category: Chang S]]
-
[[Category: Gilmore, M]]
+
[[Category: Gilmore M]]
-
[[Category: Madegowda, M]]
+
[[Category: Madegowda M]]
-
[[Category: Maletic, M]]
+
[[Category: Maletic M]]
-
[[Category: Structural genomic]]
+
[[Category: Patskovsky Y]]
-
[[Category: Patskovsky, Y]]
+
[[Category: Sauder JM]]
-
[[Category: Sauder, J M]]
+
[[Category: Smith D]]
-
[[Category: Smith, D]]
+
[[Category: Swaminathan S]]
-
[[Category: Swaminathan, S]]
+
-
[[Category: Bleomycin resistance]]
+
-
[[Category: Glyoxalase]]
+
-
[[Category: Lyase]]
+
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
+
-
[[Category: PSI, Protein structure initiative]]
+

Revision as of 07:53, 9 March 2022

Crystal structure of a putative lactoylglutathione lyase from Bdellovibrio bacteriovorus

PDB ID 3g12

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools