3gq7
From Proteopedia
(Difference between revisions)
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==Crystal Structure of the Bacteriophage Phi29 Gene Product 12 N-terminal Fragment== | ==Crystal Structure of the Bacteriophage Phi29 Gene Product 12 N-terminal Fragment== | ||
| - | <StructureSection load='3gq7' size='340' side='right' caption='[[3gq7]], [[Resolution|resolution]] 2.05Å' scene=''> | + | <StructureSection load='3gq7' size='340' side='right'caption='[[3gq7]], [[Resolution|resolution]] 2.05Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3gq7]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3gq7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bpph2 Bpph2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GQ7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GQ7 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CO3:CARBONATE+ION'>CO3</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3gq8|3gq8]], [[3gq9|3gq9]], [[3gqa|3gqa]], [[3gqh|3gqh]], [[3gqk|3gqk]], [[3gqn|3gqn]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3gq8|3gq8]], [[3gq9|3gq9]], [[3gqa|3gqa]], [[3gqh|3gqh]], [[3gqk|3gqk]], [[3gqn|3gqn]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">12, gene product 12 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">12, gene product 12 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10756 BPPH2])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gq7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gq7 OCA], [https://pdbe.org/3gq7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gq7 RCSB], [https://www.ebi.ac.uk/pdbsum/3gq7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gq7 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/3gq7_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/3gq7_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Bpph2]] | [[Category: Bpph2]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Rossmann, M G]] | [[Category: Rossmann, M G]] | ||
[[Category: Xiang, Y]] | [[Category: Xiang, Y]] | ||
[[Category: Beta helix]] | [[Category: Beta helix]] | ||
[[Category: Viral protein]] | [[Category: Viral protein]] | ||
Revision as of 07:52, 16 March 2022
Crystal Structure of the Bacteriophage Phi29 Gene Product 12 N-terminal Fragment
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