7asl
From Proteopedia
(Difference between revisions)
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==HIV-1 Gag immature lattice. GagSP1T8I== | ==HIV-1 Gag immature lattice. GagSP1T8I== | ||
- | <StructureSection load='7asl' size='340' side='right'caption='[[7asl]]' scene=''> | + | <StructureSection load='7asl' size='340' side='right'caption='[[7asl]], [[Resolution|resolution]] 4.50Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7ASL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7ASL FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7asl]] is a 18 chain structure with sequence from [https://en.wikipedia.org/wiki/9hiv1 9hiv1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7ASL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7ASL FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7asl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7asl OCA], [https://pdbe.org/7asl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7asl RCSB], [https://www.ebi.ac.uk/pdbsum/7asl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7asl ProSAT]</span></td></tr> | + | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">gag ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11676 9HIV1])</td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7asl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7asl OCA], [https://pdbe.org/7asl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7asl RCSB], [https://www.ebi.ac.uk/pdbsum/7asl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7asl ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Gag is the HIV structural precursor protein which is cleaved by viral protease to produce mature infectious viruses. Gag is a polyprotein composed of MA (matrix), CA (capsid), SP1, NC (nucleocapsid), SP2 and p6 domains. SP1, together with the last eight residues of CA, have been hypothesized to form a six-helix bundle responsible for the higher-order multimerization of Gag necessary for HIV particle assembly. However, the structure of the complete six-helix bundle has been elusive. Here, we determined the structures of both Gag in vitro assemblies and Gag viral-like particles (VLPs) to 4.2 A and 4.5 A resolutions using cryo-electron tomography and subtomogram averaging by emClarity. A single amino acid mutation (T8I) in SP1 stabilizes the six-helix bundle, allowing to discern the entire CA-SP1 helix connecting to the NC domain. These structures provide a blueprint for future development of small molecule inhibitors that can lock SP1 in a stable helical conformation, interfere with virus maturation, and thus block HIV-1 infection. | ||
+ | |||
+ | CryoET structures of immature HIV Gag reveal six-helix bundle.,Mendonca L, Sun D, Ning J, Liu J, Kotecha A, Olek M, Frosio T, Fu X, Himes BA, Kleinpeter AB, Freed EO, Zhou J, Aiken C, Zhang P Commun Biol. 2021 Apr 16;4(1):481. doi: 10.1038/s42003-021-01999-1. PMID:33863979<ref>PMID:33863979</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7asl" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Mendonca L]] | + | [[Category: Mendonca, L]] |
- | [[Category: Zhang P]] | + | [[Category: Zhang, P]] |
+ | [[Category: Ca-sp1]] | ||
+ | [[Category: Gag]] | ||
+ | [[Category: Hiv]] | ||
+ | [[Category: Immature lattice]] | ||
+ | [[Category: T8i]] | ||
+ | [[Category: Viral protein]] |
Revision as of 11:52, 23 March 2022
HIV-1 Gag immature lattice. GagSP1T8I
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Categories: Large Structures | Mendonca, L | Zhang, P | Ca-sp1 | Gag | Hiv | Immature lattice | T8i | Viral protein