2vd0
From Proteopedia
(Difference between revisions)
Line 3: | Line 3: | ||
<StructureSection load='2vd0' size='340' side='right'caption='[[2vd0]], [[Resolution|resolution]] 2.20Å' scene=''> | <StructureSection load='2vd0' size='340' side='right'caption='[[2vd0]], [[Resolution|resolution]] 2.20Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2vd0]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2vd0]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VD0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VD0 FirstGlance]. <br> |
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=D27:2-{[(2E)-3-(3,4-DIMETHOXYPHENYL)PROP-2-ENOYL]AMINO}BENZOIC+ACID'>D27</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GSH:GLUTATHIONE'>GSH</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=D27:2-{[(2E)-3-(3,4-DIMETHOXYPHENYL)PROP-2-ENOYL]AMINO}BENZOIC+ACID'>D27</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GSH:GLUTATHIONE'>GSH</scene></td></tr> | ||
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1iyh|1iyh]], [[1iyi|1iyi]], [[1v40|1v40]], [[2vcq|2vcq]], [[2vcw|2vcw]], [[2vcz|2vcz]], [[2vcx|2vcx]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1iyh|1iyh]], [[1iyi|1iyi]], [[1v40|1v40]], [[2vcq|2vcq]], [[2vcw|2vcw]], [[2vcz|2vcz]], [[2vcx|2vcx]]</div></td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Prostaglandin-D_synthase Prostaglandin-D synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.99.2 5.3.99.2] </span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vd0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vd0 OCA], [https://pdbe.org/2vd0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vd0 RCSB], [https://www.ebi.ac.uk/pdbsum/2vd0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vd0 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [[ | + | [[https://www.uniprot.org/uniprot/HPGDS_HUMAN HPGDS_HUMAN]] Bifunctional enzyme which catalyzes both the conversion of PGH2 to PGD2, a prostaglandin involved in smooth muscle contraction/relaxation and a potent inhibitor of platelet aggregation, and the conjugation of glutathione with a wide range of aryl halides and organic isothiocyanates. Also exhibits low glutathione-peroxidase activity towards cumene hydroperoxide.<ref>PMID:10824118</ref> <ref>PMID:11672424</ref> <ref>PMID:9425264</ref> <ref>PMID:9353279</ref> <ref>PMID:12627223</ref> <ref>PMID:15113825</ref> <ref>PMID:16547010</ref> <ref>PMID:19939518</ref> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] |
Revision as of 11:34, 30 March 2022
Complex structure of prostaglandin D2 synthase at 2.2A.
|
Categories: Human | Large Structures | Prostaglandin-D synthase | Dahmen, J | Edman, K | Folmer, R H.A | Groth-Clausen, I | Hawtin, P | Hohwy, M | Lundquist, B | Persdotter, S | Spadola, L | Wachenfeldt, K von | Asthma | Cytoplasm | Fatty acid biosynthesis | Isomerase | Lipid synthesis | Pgd | Prostaglandin biosynthesis | Prostaglandin d2 synthase