3irc
From Proteopedia
(Difference between revisions)
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==Crystal structure analysis of dengue-1 envelope protein domain III== | ==Crystal structure analysis of dengue-1 envelope protein domain III== | ||
- | <StructureSection load='3irc' size='340' side='right' caption='[[3irc]], [[Resolution|resolution]] 2.25Å' scene=''> | + | <StructureSection load='3irc' size='340' side='right'caption='[[3irc]], [[Resolution|resolution]] 2.25Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3irc]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3irc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Dengue_virus_1 Dengue virus 1]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3egp 3egp]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IRC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IRC FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ENVELOPE ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ENVELOPE ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11053 Dengue virus 1])</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3irc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3irc OCA], [https://pdbe.org/3irc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3irc RCSB], [https://www.ebi.ac.uk/pdbsum/3irc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3irc ProSAT], [https://www.topsan.org/Proteins/CSGID/3irc TOPSAN]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [[ | + | [[https://www.uniprot.org/uniprot/Q9J7C6_9FLAV Q9J7C6_9FLAV]] Envelope protein E binding to host cell surface receptor is followed by virus internalization through clathrin-mediated endocytosis. Envelope protein E is subsequently involved in membrane fusion between virion and host late endosomes. Synthesized as a homodimer with prM which acts as a chaperone for envelope protein E. After cleavage of prM, envelope protein E dissociate from small envelope protein M and homodimerizes (By similarity).[SAAS:SAAS026470_004_099774] |
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Dengue virus 1]] | [[Category: Dengue virus 1]] | ||
+ | [[Category: Large Structures]] | ||
[[Category: Structural genomic]] | [[Category: Structural genomic]] | ||
[[Category: Chruszcz, M]] | [[Category: Chruszcz, M]] |
Revision as of 09:55, 13 April 2022
Crystal structure analysis of dengue-1 envelope protein domain III
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Categories: Dengue virus 1 | Large Structures | Structural genomic | Chruszcz, M | Fremont, D H | Kim, T | Minor, W | Nelson, C A | Warren, J T | Atp-binding | Csgid | Envelope | Envelope protein | Helicase | Hydrolase | Membrane | Nucleotide-binding | Rna replication | Transmembrane | Viral protein | Virion | Virus