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3i7u
From Proteopedia
(Difference between revisions)
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==Crystal structure of AP4A hydrolase (aq_158) from Aquifex aeolicus VF5== | ==Crystal structure of AP4A hydrolase (aq_158) from Aquifex aeolicus VF5== | ||
| - | <StructureSection load='3i7u' size='340' side='right' caption='[[3i7u]], [[Resolution|resolution]] 1.80Å' scene=''> | + | <StructureSection load='3i7u' size='340' side='right'caption='[[3i7u]], [[Resolution|resolution]] 1.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3i7u]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3i7u]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquae Aquae]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2pbt 2pbt]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I7U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I7U FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3i7v|3i7v]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3i7v|3i7v]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">apfA, aq_158 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">apfA, aq_158 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i7u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i7u OCA], [https://pdbe.org/3i7u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i7u RCSB], [https://www.ebi.ac.uk/pdbsum/3i7u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i7u ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Aquae]] | [[Category: Aquae]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Jeyakanthan, J]] | [[Category: Jeyakanthan, J]] | ||
[[Category: Kanaujia, S P]] | [[Category: Kanaujia, S P]] | ||
Revision as of 11:00, 13 April 2022
Crystal structure of AP4A hydrolase (aq_158) from Aquifex aeolicus VF5
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Categories: Aquae | Large Structures | Jeyakanthan, J | Kanaujia, S P | Kuramitsu, S | Nakagawa, N | Structural genomic | Sekar, K | Shinkai, A | Yokoyama, S | Ap4a | Diadenosine polyphosphate | Hydrolase | National project on protein structural and functional analyse | Nppsfa | Nudix protein | Rsgi

