3i7v
From Proteopedia
(Difference between revisions)
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==Crystal structure of AP4A hydrolase complexed with AP4A (ATP) (aq_158) from Aquifex aeolicus Vf5== | ==Crystal structure of AP4A hydrolase complexed with AP4A (ATP) (aq_158) from Aquifex aeolicus Vf5== | ||
| - | <StructureSection load='3i7v' size='340' side='right' caption='[[3i7v]], [[Resolution|resolution]] 1.95Å' scene=''> | + | <StructureSection load='3i7v' size='340' side='right'caption='[[3i7v]], [[Resolution|resolution]] 1.95Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3i7v]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3i7v]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquae Aquae]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2pq1 2pq1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I7V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3I7V FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=B4P:BIS(ADENOSINE)-5-TETRAPHOSPHATE'>B4P</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=B4P:BIS(ADENOSINE)-5-TETRAPHOSPHATE'>B4P</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3i7u|3i7u]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3i7u|3i7u]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">apfA, aq_158 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">apfA, aq_158 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224324 AQUAE])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3i7v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i7v OCA], [https://pdbe.org/3i7v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3i7v RCSB], [https://www.ebi.ac.uk/pdbsum/3i7v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3i7v ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Aquae]] | [[Category: Aquae]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Jeyakanthan, J]] | [[Category: Jeyakanthan, J]] | ||
[[Category: Kanaujia, S P]] | [[Category: Kanaujia, S P]] | ||
Revision as of 11:00, 13 April 2022
Crystal structure of AP4A hydrolase complexed with AP4A (ATP) (aq_158) from Aquifex aeolicus Vf5
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Categories: Aquae | Large Structures | Jeyakanthan, J | Kanaujia, S P | Kuramitsu, S | Nakagawa, N | Structural genomic | Sekar, K | Shinkai, A | Yokoyama, S | Ap4a | Diadenosine polyphosphate | Hydrolase | National project on protein structural and functional analyse | Nppsfa | Nudix protein | Rsgi

