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== Conformational Changes == | == Conformational Changes == | ||
| - | [[Image:Overview_mGlu_2.jpg|900 px|center|thumb|Figure 3. Illustration of mGlu's conformational change process.]] | ||
'''1.''' In its resting state, mGlu is in an <scene name='90/904320/Inactive_mglu2_first_picture/6'>inactive homodimeric form</scene>. In this conformation, the receptor is considered open with an inter-lobe angle of 44°<ref name="Seven">PMID:34194039</ref>. The structure has two free glutamate binding sites in the VFT, the CRDs are separated, and the TMD is not interacting with a G protein<ref name="Seven">PMID:34194039</ref>. | '''1.''' In its resting state, mGlu is in an <scene name='90/904320/Inactive_mglu2_first_picture/6'>inactive homodimeric form</scene>. In this conformation, the receptor is considered open with an inter-lobe angle of 44°<ref name="Seven">PMID:34194039</ref>. The structure has two free glutamate binding sites in the VFT, the CRDs are separated, and the TMD is not interacting with a G protein<ref name="Seven">PMID:34194039</ref>. | ||
'''2.''' In the intermediate activation state, also known as the open-closed conformation, one glutamate is bound in one binding pocket of VFT. This single <scene name='90/904320/Mglu_binding/9'>glutamate bound state</scene> is still considered inactive as the receptor has not changed the conformations in the CRD and thus the TMD. With the same asymmetric transmembrane helices formation, a <scene name='90/904320/Inactive_tmd_interface/1'>TM3-TM4 interface</scene> is still present and mGlu cannot interact with a G protein<ref name="Seven">PMID:34194039</ref>. | '''2.''' In the intermediate activation state, also known as the open-closed conformation, one glutamate is bound in one binding pocket of VFT. This single <scene name='90/904320/Mglu_binding/9'>glutamate bound state</scene> is still considered inactive as the receptor has not changed the conformations in the CRD and thus the TMD. With the same asymmetric transmembrane helices formation, a <scene name='90/904320/Inactive_tmd_interface/1'>TM3-TM4 interface</scene> is still present and mGlu cannot interact with a G protein<ref name="Seven">PMID:34194039</ref>. | ||
| - | [[Image: | + | [[Image:Overview_mGlu_2.jpg|900 px|center|thumb|Figure 3. Illustration of mGlu's conformational change process.]] |
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'''3.''' A second glutamate then binds to the other <scene name='90/904320/Active_site_interactions/4'>binding pocket</scene> of the VFT. Mediated by L639, F643, N735, W773, and F776, a <scene name='90/904320/Pam/8'>positive allosteric modulator</scene> (PAM) also binds within the seven TMD helices of the alpha chain <ref name="Seven">PMID:34194039</ref>. This closed conformation of the VFT now has an inter-lobe angle of 25° is considered to be in the <scene name='90/904320/Active_mglu/10'>active conformation</scene><ref name="Seven">PMID:34194039</ref>. The binding of these ligands allows the CRDs to compact and come together. This transformation causes the TMD to form a separate, active asymmetric conformation with a <scene name='90/904320/Active_helices/14'>TM6-TM6 interface</scene> between the chains<ref name="Seven">PMID:34194039</ref>. | '''3.''' A second glutamate then binds to the other <scene name='90/904320/Active_site_interactions/4'>binding pocket</scene> of the VFT. Mediated by L639, F643, N735, W773, and F776, a <scene name='90/904320/Pam/8'>positive allosteric modulator</scene> (PAM) also binds within the seven TMD helices of the alpha chain <ref name="Seven">PMID:34194039</ref>. This closed conformation of the VFT now has an inter-lobe angle of 25° is considered to be in the <scene name='90/904320/Active_mglu/10'>active conformation</scene><ref name="Seven">PMID:34194039</ref>. The binding of these ligands allows the CRDs to compact and come together. This transformation causes the TMD to form a separate, active asymmetric conformation with a <scene name='90/904320/Active_helices/14'>TM6-TM6 interface</scene> between the chains<ref name="Seven">PMID:34194039</ref>. | ||
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| + | [[Image:Screen Shot 2022-04-18 at 10.20.26 PM.png|300 px|right|thumb|Figure 4. The interaction between an active mGlu (magenta/lime/purple/crimson) and a G-protein (orange). Hydrogen bonds are shown through black dashes]] | ||
'''4.''' The crossover of the helices from the alpha and beta chains allows for intracellular loop 2 (ICL2) and the C-terminus to be properly ordered to interact with a single G protein<ref name="Seven">PMID:34194039</ref>. While hydrogen bonding is present between the C-terminus and alpha helix 5 of the G-protein, this <scene name='90/904320/Active_mglu/9'>mGlu/G-protein coupling</scene> is primarily driven by the hydrophobic interactions in the interface with the ɑ5 helix of the G protein<ref name="Seven">PMID:34194039</ref>(Figure 4). This coupling can only occur in the presence of a <scene name='90/904320/Pam/8'>PAM</scene> as the pocket in which the coupling occurs would be completely closed in its absence<ref name="Seven">PMID:34194039</ref>. | '''4.''' The crossover of the helices from the alpha and beta chains allows for intracellular loop 2 (ICL2) and the C-terminus to be properly ordered to interact with a single G protein<ref name="Seven">PMID:34194039</ref>. While hydrogen bonding is present between the C-terminus and alpha helix 5 of the G-protein, this <scene name='90/904320/Active_mglu/9'>mGlu/G-protein coupling</scene> is primarily driven by the hydrophobic interactions in the interface with the ɑ5 helix of the G protein<ref name="Seven">PMID:34194039</ref>(Figure 4). This coupling can only occur in the presence of a <scene name='90/904320/Pam/8'>PAM</scene> as the pocket in which the coupling occurs would be completely closed in its absence<ref name="Seven">PMID:34194039</ref>. | ||
Revision as of 06:52, 19 April 2022
Metabotropic Glutamate Receptor
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Student Contributors
- Courtney Vennekotter
- Cade Chezem
