7lvj
From Proteopedia
(Difference between revisions)
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==CASP8 isoform G DED domain== | ==CASP8 isoform G DED domain== | ||
- | <StructureSection load='7lvj' size='340' side='right'caption='[[7lvj]]' scene=''> | + | <StructureSection load='7lvj' size='340' side='right'caption='[[7lvj]], [[Resolution|resolution]] 1.50Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7LVJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7LVJ FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7lvj]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7LVJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7LVJ FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7lvj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7lvj OCA], [https://pdbe.org/7lvj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7lvj RCSB], [https://www.ebi.ac.uk/pdbsum/7lvj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7lvj ProSAT]</span></td></tr> | + | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[7lvm|7lvm]]</div></td></tr> |
+ | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Caspase-8 Caspase-8], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.22.61 3.4.22.61] </span></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7lvj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7lvj OCA], [https://pdbe.org/7lvj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7lvj RCSB], [https://www.ebi.ac.uk/pdbsum/7lvj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7lvj ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | OBJECTIVE: Fibroblast-like synoviocytes (FLS) play a pivotal role in rheumatoid arthritis (RA) by contributing to synovial inflammation and progressive joint damage. An imprinted epigenetic state is associated with the FLS aggressive phenotype. We identified CASP8 (encoding for caspase-8) as a differentially marked gene and evaluated its pathogenic role in RA FLSs. METHODS: RA FLS lines were obtained from synovial tissues at arthroplasty and used at passage 5-8. Caspase-8 was silenced using small interfering RNA, and its effect was determined in cell adhesion, migration and invasion assays. Quantitative reverse transcription PCR and western blot were used to assess gene and protein expression, respectively. A caspase-8 selective inhibitor was used determine the role of enzymatic activity on FLS migration and invasion. Caspase-8 isoform transcripts and epigenetic marks in FLSs were analyzed in FLS public databases. Crystal structures of caspase-8B and G were determined. RESULTS: Caspase-8 deficiency in RA FLSs reduced cell adhesion, migration, and invasion independent of its catalytic activity. Epigenetic and transcriptomic analyses of RA FLSs revealed that a specific caspase-8 isoform, variant G, is the dominant isoform expressed (~80% of total caspase-8) and induced by PDGF. The crystal structures of caspase-8 variant G and B were identical except for a unique unstructured 59 amino acid N-terminal domain in variant G. Selective knockdown of caspase-8G was solely responsible for the effects of caspase-8 on calpain activity and cell invasion in FLS. CONCLUSION: Blocking caspase-8 variant G could decrease cell invasion in diseases like RA without the potential deleterious effects of nonspecific caspase-8 inhibition. | ||
+ | |||
+ | Caspase-8 Variant G Regulates Rheumatoid Arthritis Fibroblast-Like Synoviocyte Aggressive Behavior.,Ansalone C, Ainsworth RI, Nygaard G, Ai R, Prideaux EB, Hammaker D, Perumal NB, Weichert K, Tung F, Kodandapani L, Sauder JM, Mertsching EC, Benschop RJ, Boyle DL, Wang W, Firestein GS ACR Open Rheumatol. 2021 Dec 28. doi: 10.1002/acr2.11384. PMID:34963199<ref>PMID:34963199</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7lvj" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Caspase-8]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Kodandapani L]] | + | [[Category: Kodandapani, L]] |
- | [[Category: Lu F]] | + | [[Category: Lu, F]] |
- | [[Category: Sauder | + | [[Category: Sauder, J M]] |
- | [[Category: Weichert K]] | + | [[Category: Weichert, K]] |
+ | [[Category: Casp8]] | ||
+ | [[Category: Casp8g]] | ||
+ | [[Category: Casp8g ded]] | ||
+ | [[Category: Gene id: 841]] | ||
+ | [[Category: Hydrolase]] |
Revision as of 03:04, 21 April 2022
CASP8 isoform G DED domain
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Categories: Caspase-8 | Large Structures | Kodandapani, L | Lu, F | Sauder, J M | Weichert, K | Casp8 | Casp8g | Casp8g ded | Gene id: 841 | Hydrolase