This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3ivp
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==The structure of a possible transposon-related DNA-binding protein from Clostridium difficile 630.== | ==The structure of a possible transposon-related DNA-binding protein from Clostridium difficile 630.== | ||
| - | <StructureSection load='3ivp' size='340' side='right' caption='[[3ivp]], [[Resolution|resolution]] 2.02Å' scene=''> | + | <StructureSection load='3ivp' size='340' side='right'caption='[[3ivp]], [[Resolution|resolution]] 2.02Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3ivp]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3ivp]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridioides_difficile_630 Clostridioides difficile 630]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IVP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IVP FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr> |
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CD3330, Clostridium difficile ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CD3330, Clostridium difficile ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272563 Clostridioides difficile 630])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ivp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ivp OCA], [https://pdbe.org/3ivp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ivp RCSB], [https://www.ebi.ac.uk/pdbsum/3ivp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ivp ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
| Line 22: | Line 22: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Clostridioides difficile 630]] | [[Category: Clostridioides difficile 630]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Jedrzejczak, R]] | [[Category: Jedrzejczak, R]] | ||
[[Category: Joachimiak, A]] | [[Category: Joachimiak, A]] | ||
Current revision
The structure of a possible transposon-related DNA-binding protein from Clostridium difficile 630.
| |||||||||||
