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== Structure ==
== Structure ==
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Brain-derived neurotrophic factor is a relatively small protein, only 27.48 kDa, made of 119 amino acid residues (Protein Data Bank). The secondary structure of the protein is primarily beta-sheets with only a small number of alpha-helices (Protein Data Bank). The protein is a non-covalently linked heterodimer and has close structural homology to nerve growth factor (NGF) proteins <ref name="Binder-2004" />. BDNF contains a cysteine knot motif, indicating its importance in neurogenesis.
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Brain-derived neurotrophic factor is a relatively small protein, only 27.48 kDa, made of 119 amino acid residues <ref> Bank, R. P. D. (n.d.). 3D View: 1B8M. Protein Data Bank. Retrieved April 18, 2022, from https://www.rcsb.org/3d-view/1B8M</ref>. The secondary structure of the protein is primarily beta-sheets with only a small number of alpha-helices (Protein Data Bank). The protein is a non-covalently linked heterodimer and has close structural homology to nerve growth factor (NGF) proteins <ref name="Binder-2004" />. BDNF contains a cysteine knot motif, indicating its importance in neurogenesis.
There are a few single-nucleotide polymorphisms (SNPs) of BDNF. The most commonly studied one is Val66Met and is exclusive to humans. This point mutation occurs at position 196 (or amino acid residue 66) and mutates a guanine to adenine. Upon transcription, this mutation causes an amino acid switch of valine to methionine. This polymorphism plays a role in destabilizing the mRNA transcript, leading to premature degradation <ref>DOI 10.3389/fnins.2013.00188</ref>. The protein that is able to be translated is not trafficked or secreted sufficiently. It can potentially alter protein-protein interactions, binding affinities, localisation, or conformational stability of the protein (Nociti, 2020). Those with this deficit show a decline in short-term episodic memory along with abnormal activity in the hippocampus (Martinowich, 2007). This mutation is also associated with major depressive disorder (Martinowich, 2007).
There are a few single-nucleotide polymorphisms (SNPs) of BDNF. The most commonly studied one is Val66Met and is exclusive to humans. This point mutation occurs at position 196 (or amino acid residue 66) and mutates a guanine to adenine. Upon transcription, this mutation causes an amino acid switch of valine to methionine. This polymorphism plays a role in destabilizing the mRNA transcript, leading to premature degradation <ref>DOI 10.3389/fnins.2013.00188</ref>. The protein that is able to be translated is not trafficked or secreted sufficiently. It can potentially alter protein-protein interactions, binding affinities, localisation, or conformational stability of the protein (Nociti, 2020). Those with this deficit show a decline in short-term episodic memory along with abnormal activity in the hippocampus (Martinowich, 2007). This mutation is also associated with major depressive disorder (Martinowich, 2007).

Revision as of 20:42, 28 April 2022

Brain-Derived Neurotrophic Factor

Caption for this structure

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References

  1. 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 Bathina S, Das UN. Brain-derived neurotrophic factor and its clinical implications. Arch Med Sci. 2015 Dec 10;11(6):1164-78. doi: 10.5114/aoms.2015.56342. Epub 2015 , Dec 11. PMID:26788077 doi:http://dx.doi.org/10.5114/aoms.2015.56342
  2. 2.0 2.1 Binder DK, Scharfman HE. Brain-derived neurotrophic factor. Growth Factors. 2004 Sep;22(3):123-31. doi: 10.1080/08977190410001723308. PMID:15518235 doi:http://dx.doi.org/10.1080/08977190410001723308
  3. Bank, R. P. D. (n.d.). 3D View: 1B8M. Protein Data Bank. Retrieved April 18, 2022, from https://www.rcsb.org/3d-view/1B8M
  4. Baj G, Carlino D, Gardossi L, Tongiorgi E. Toward a unified biological hypothesis for the BDNF Val66Met-associated memory deficits in humans: a model of impaired dendritic mRNA trafficking. Front Neurosci. 2013 Oct 30;7:188. doi: 10.3389/fnins.2013.00188. PMID:24198753 doi:http://dx.doi.org/10.3389/fnins.2013.00188

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Meghan Pemberton

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