User:Meghan Pemberton/Sandbox 1
From Proteopedia
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== Structure == | == Structure == | ||
Brain-derived neurotrophic factor is a relatively small protein, only 27.48 kDa, made of 119 amino acid residues <ref name="Bank">Bank, R. P. D. (n.d.). 3D View: 1B8M. Protein Data Bank. Retrieved April 18, 2022, from https://www.rcsb.org/3d-view/1B8M</ref>. The secondary structure of the protein is primarily beta-sheets with only a small number of alpha-helices <ref name="Bank" />. The protein is a non-covalently linked heterodimer and has close structural homology to nerve growth factor (NGF) proteins <ref name="Binder-2004" />. BDNF contains a cysteine knot motif, indicating its importance in neurogenesis. | Brain-derived neurotrophic factor is a relatively small protein, only 27.48 kDa, made of 119 amino acid residues <ref name="Bank">Bank, R. P. D. (n.d.). 3D View: 1B8M. Protein Data Bank. Retrieved April 18, 2022, from https://www.rcsb.org/3d-view/1B8M</ref>. The secondary structure of the protein is primarily beta-sheets with only a small number of alpha-helices <ref name="Bank" />. The protein is a non-covalently linked heterodimer and has close structural homology to nerve growth factor (NGF) proteins <ref name="Binder-2004" />. BDNF contains a cysteine knot motif, indicating its importance in neurogenesis. | ||
- | There are a few single-nucleotide polymorphisms (SNPs) of BDNF. The most commonly studied one is Val66Met and is exclusive to humans. This point mutation occurs at position 196 (or amino acid residue 66) and mutates a guanine to adenine. Upon transcription, this mutation causes an amino acid switch of valine to methionine. This polymorphism plays a role in destabilizing the mRNA transcript, leading to premature degradation <ref>DOI 10.3389/fnins.2013.00188</ref>. The protein that is able to be translated is not trafficked or secreted sufficiently. It can potentially alter protein-protein interactions, binding affinities, localisation, or conformational stability of the protein <ref name="Nociti-2020">DOI 10.20517/2347-8659.2020.25</ref>. Those with this deficit show a decline in short-term episodic memory along with abnormal activity in the hippocampus <ref name="Martin-2000" />. This mutation is also associated with major depressive disorder <ref name="Martin-2000" />. | + | There are a few single-nucleotide polymorphisms (SNPs) of BDNF. The most commonly studied one is <scene name='91/911206/Val66met/1'>Val66Met</scene> and is exclusive to humans. This point mutation occurs at position 196 (or amino acid residue 66) and mutates a guanine to adenine. Upon transcription, this mutation causes an amino acid switch of valine to methionine. This polymorphism plays a role in destabilizing the mRNA transcript, leading to premature degradation <ref>DOI 10.3389/fnins.2013.00188</ref>. The protein that is able to be translated is not trafficked or secreted sufficiently. It can potentially alter protein-protein interactions, binding affinities, localisation, or conformational stability of the protein <ref name="Nociti-2020">DOI 10.20517/2347-8659.2020.25</ref>. Those with this deficit show a decline in short-term episodic memory along with abnormal activity in the hippocampus <ref name="Martin-2000" />. This mutation is also associated with major depressive disorder <ref name="Martin-2000" />. |
== Functions == | == Functions == |
Revision as of 21:15, 28 April 2022
Brain-Derived Neurotrophic Factor
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References
- ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 Bathina S, Das UN. Brain-derived neurotrophic factor and its clinical implications. Arch Med Sci. 2015 Dec 10;11(6):1164-78. doi: 10.5114/aoms.2015.56342. Epub 2015 , Dec 11. PMID:26788077 doi:http://dx.doi.org/10.5114/aoms.2015.56342
- ↑ 2.0 2.1 Binder DK, Scharfman HE. Brain-derived neurotrophic factor. Growth Factors. 2004 Sep;22(3):123-31. doi: 10.1080/08977190410001723308. PMID:15518235 doi:http://dx.doi.org/10.1080/08977190410001723308
- ↑ 3.0 3.1 3.2 3.3 3.4 Martinowich K, Lu B. Interaction between BDNF and serotonin: role in mood disorders. Neuropsychopharmacology. 2008 Jan;33(1):73-83. doi: 10.1038/sj.npp.1301571. Epub , 2007 Sep 19. PMID:17882234 doi:http://dx.doi.org/10.1038/sj.npp.1301571
- ↑ Martin SJ, Grimwood PD, Morris RG. Synaptic plasticity and memory: an evaluation of the hypothesis. Annu Rev Neurosci. 2000;23:649-711. doi: 10.1146/annurev.neuro.23.1.649. PMID:10845078 doi:http://dx.doi.org/10.1146/annurev.neuro.23.1.649
- ↑ Demetre, D. C. (2009, May 17). What Is Brain-derived Neurotrophic Factor? Sciencebeta. Retrieved April 20, 2022, from https://sciencebeta.com/definition-brain-derived-neurotrophic-factor/
- ↑ 6.0 6.1 Phillips C. Brain-Derived Neurotrophic Factor, Depression, and Physical Activity: Making the Neuroplastic Connection. Neural Plast. 2017;2017:7260130. doi: 10.1155/2017/7260130. Epub 2017 Aug 8. PMID:28928987 doi:http://dx.doi.org/10.1155/2017/7260130
- ↑ 7.0 7.1 Bank, R. P. D. (n.d.). 3D View: 1B8M. Protein Data Bank. Retrieved April 18, 2022, from https://www.rcsb.org/3d-view/1B8M
- ↑ Baj G, Carlino D, Gardossi L, Tongiorgi E. Toward a unified biological hypothesis for the BDNF Val66Met-associated memory deficits in humans: a model of impaired dendritic mRNA trafficking. Front Neurosci. 2013 Oct 30;7:188. doi: 10.3389/fnins.2013.00188. PMID:24198753 doi:http://dx.doi.org/10.3389/fnins.2013.00188
- ↑ 9.0 9.1 9.2 9.3 9.4 doi: https://dx.doi.org/10.20517/2347-8659.2020.25
- ↑ 10.0 10.1 Anand KS, Dhikav V. Hippocampus in health and disease: An overview. Ann Indian Acad Neurol. 2012 Oct;15(4):239-46. doi: 10.4103/0972-2327.104323. PMID:23349586 doi:http://dx.doi.org/10.4103/0972-2327.104323
- ↑ Lynch G, Rex CS, Gall CM. Synaptic plasticity in early aging. Ageing Res Rev. 2006 Aug;5(3):255-80. doi: 10.1016/j.arr.2006.03.008. Epub 2006, Aug 28. PMID:16935034 doi:http://dx.doi.org/10.1016/j.arr.2006.03.008
- ↑ Tanila H. The role of BDNF in Alzheimer's disease. Neurobiol Dis. 2017 Jan;97(Pt B):114-118. doi: 10.1016/j.nbd.2016.05.008. Epub, 2016 May 13. PMID:27185594 doi:http://dx.doi.org/10.1016/j.nbd.2016.05.008