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== Structure ==
== Structure ==
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Brain-derived neurotrophic factor is a relatively small protein, only 27.48 kDa, made of 119 amino acid residues <ref name="Bank">Bank, R. P. D. (n.d.). 3D View: 1B8M. Protein Data Bank. Retrieved April 18, 2022, from https://www.rcsb.org/3d-view/1B8M</ref>. The secondary structure of the protein is primarily beta-sheets with only a small number of alpha-helices <ref name="Bank" />. The protein is a non-covalently linked heterodimer and has close structural homology to nerve growth factor (NGF) proteins <ref name="Binder-2004" />. BDNF contains a cysteine knot motif, indicating its importance in neurogenesis.
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Brain-derived neurotrophic factor is a relatively small protein, only 27.48 kDa, made of 119 amino acid residues <ref name="Bank">Bank, R. P. D. (n.d.). 3D View: 1B8M. Protein Data Bank. Retrieved April 18, 2022, from https://www.rcsb.org/3d-view/1B8M</ref>. The secondary structure of the protein is primarily beta-sheets with only a small number of alpha-helices <ref name="Bank" />. The protein is a non-covalently linked heterodimer and has close structural homology to nerve growth factor (NGF) proteins <ref name="Binder-2004" />. BDNF contains a <scene name='91/911206/Cysteine_knot/2'>cysteine</scene> knot motif, indicating its importance in neurogenesis.
There are a few single-nucleotide polymorphisms (SNPs) of BDNF. The most commonly studied one is <scene name='91/911206/Val66met/3'>Val66Met</scene> and is exclusive to humans. This point mutation occurs at position 196 (or amino acid residue 66) and mutates a guanine to adenine. Upon transcription, this mutation causes an amino acid switch of valine to methionine. This polymorphism plays a role in destabilizing the mRNA transcript, leading to premature degradation <ref>DOI 10.3389/fnins.2013.00188</ref>. The protein that is able to be translated is not trafficked or secreted sufficiently. It can potentially alter protein-protein interactions, binding affinities, localisation, or conformational stability of the protein <ref name="Nociti-2020">DOI 10.20517/2347-8659.2020.25</ref>. Those with this deficit show a decline in short-term episodic memory along with abnormal activity in the hippocampus <ref name="Martin-2000" />. This mutation is also associated with major depressive disorder <ref name="Martin-2000" />.
There are a few single-nucleotide polymorphisms (SNPs) of BDNF. The most commonly studied one is <scene name='91/911206/Val66met/3'>Val66Met</scene> and is exclusive to humans. This point mutation occurs at position 196 (or amino acid residue 66) and mutates a guanine to adenine. Upon transcription, this mutation causes an amino acid switch of valine to methionine. This polymorphism plays a role in destabilizing the mRNA transcript, leading to premature degradation <ref>DOI 10.3389/fnins.2013.00188</ref>. The protein that is able to be translated is not trafficked or secreted sufficiently. It can potentially alter protein-protein interactions, binding affinities, localisation, or conformational stability of the protein <ref name="Nociti-2020">DOI 10.20517/2347-8659.2020.25</ref>. Those with this deficit show a decline in short-term episodic memory along with abnormal activity in the hippocampus <ref name="Martin-2000" />. This mutation is also associated with major depressive disorder <ref name="Martin-2000" />.

Revision as of 22:33, 28 April 2022

Brain-Derived Neurotrophic Factor

3D structure of Brain-Derived Neurotrophic Factor

Drag the structure with the mouse to rotate

References

  1. 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 Bathina S, Das UN. Brain-derived neurotrophic factor and its clinical implications. Arch Med Sci. 2015 Dec 10;11(6):1164-78. doi: 10.5114/aoms.2015.56342. Epub 2015 , Dec 11. PMID:26788077 doi:http://dx.doi.org/10.5114/aoms.2015.56342
  2. 2.0 2.1 Binder DK, Scharfman HE. Brain-derived neurotrophic factor. Growth Factors. 2004 Sep;22(3):123-31. doi: 10.1080/08977190410001723308. PMID:15518235 doi:http://dx.doi.org/10.1080/08977190410001723308
  3. 3.0 3.1 3.2 3.3 3.4 Martinowich K, Lu B. Interaction between BDNF and serotonin: role in mood disorders. Neuropsychopharmacology. 2008 Jan;33(1):73-83. doi: 10.1038/sj.npp.1301571. Epub , 2007 Sep 19. PMID:17882234 doi:http://dx.doi.org/10.1038/sj.npp.1301571
  4. Martin SJ, Grimwood PD, Morris RG. Synaptic plasticity and memory: an evaluation of the hypothesis. Annu Rev Neurosci. 2000;23:649-711. doi: 10.1146/annurev.neuro.23.1.649. PMID:10845078 doi:http://dx.doi.org/10.1146/annurev.neuro.23.1.649
  5. Demetre, D. C. (2009, May 17). What Is Brain-derived Neurotrophic Factor? Sciencebeta. Retrieved April 20, 2022, from https://sciencebeta.com/definition-brain-derived-neurotrophic-factor/
  6. 6.0 6.1 Phillips C. Brain-Derived Neurotrophic Factor, Depression, and Physical Activity: Making the Neuroplastic Connection. Neural Plast. 2017;2017:7260130. doi: 10.1155/2017/7260130. Epub 2017 Aug 8. PMID:28928987 doi:http://dx.doi.org/10.1155/2017/7260130
  7. 7.0 7.1 Bank, R. P. D. (n.d.). 3D View: 1B8M. Protein Data Bank. Retrieved April 18, 2022, from https://www.rcsb.org/3d-view/1B8M
  8. Baj G, Carlino D, Gardossi L, Tongiorgi E. Toward a unified biological hypothesis for the BDNF Val66Met-associated memory deficits in humans: a model of impaired dendritic mRNA trafficking. Front Neurosci. 2013 Oct 30;7:188. doi: 10.3389/fnins.2013.00188. PMID:24198753 doi:http://dx.doi.org/10.3389/fnins.2013.00188
  9. 9.0 9.1 9.2 9.3 9.4 doi: https://dx.doi.org/10.20517/2347-8659.2020.25
  10. 10.0 10.1 Anand KS, Dhikav V. Hippocampus in health and disease: An overview. Ann Indian Acad Neurol. 2012 Oct;15(4):239-46. doi: 10.4103/0972-2327.104323. PMID:23349586 doi:http://dx.doi.org/10.4103/0972-2327.104323
  11. Lynch G, Rex CS, Gall CM. Synaptic plasticity in early aging. Ageing Res Rev. 2006 Aug;5(3):255-80. doi: 10.1016/j.arr.2006.03.008. Epub 2006, Aug 28. PMID:16935034 doi:http://dx.doi.org/10.1016/j.arr.2006.03.008
  12. Tanila H. The role of BDNF in Alzheimer's disease. Neurobiol Dis. 2017 Jan;97(Pt B):114-118. doi: 10.1016/j.nbd.2016.05.008. Epub, 2016 May 13. PMID:27185594 doi:http://dx.doi.org/10.1016/j.nbd.2016.05.008

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