7tb5
From Proteopedia
(Difference between revisions)
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==Structure of P. aeruginosa PA17 CapW== | ==Structure of P. aeruginosa PA17 CapW== | ||
- | <StructureSection load='7tb5' size='340' side='right'caption='[[7tb5]]' scene=''> | + | <StructureSection load='7tb5' size='340' side='right'caption='[[7tb5]], [[Resolution|resolution]] 2.30Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7TB5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7TB5 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7tb5]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7TB5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7TB5 FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7tb5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7tb5 OCA], [https://pdbe.org/7tb5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7tb5 RCSB], [https://www.ebi.ac.uk/pdbsum/7tb5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7tb5 ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
+ | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7tb5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7tb5 OCA], [https://pdbe.org/7tb5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7tb5 RCSB], [https://www.ebi.ac.uk/pdbsum/7tb5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7tb5 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Bacteria use diverse immune systems to defend themselves from ubiquitous viruses termed bacteriophages (phages). Many anti-phage systems function by abortive infection to kill a phage-infected cell, raising the question of how they are regulated to avoid cell killing outside the context of infection. Here, we identify a transcription factor associated with the widespread CBASS bacterial immune system, that we term CapW. CapW forms a homodimer and binds a palindromic DNA sequence in the CBASS promoter region. Two crystal structures of CapW suggest that the protein switches from an unliganded, DNA binding-competent state to a ligand-bound state unable to bind DNA. We show that CapW strongly represses CBASS gene expression in uninfected cells, and that phage infection causes increased CBASS expression in a CapW-dependent manner. Unexpectedly, this CapW-dependent increase in CBASS expression is not required for robust anti-phage activity, suggesting that CapW may mediate CBASS activation and cell death in response to a signal other than phage infection. Our results parallel concurrent reports on the structure and activity of BrxR, a transcription factor associated with the BREX anti-phage system, suggesting that CapW and BrxR are members of a family of universal defense signaling proteins. | ||
+ | |||
+ | Control of bacterial immune signaling by a WYL domain transcription factor.,Blankenchip CL, Nguyen JV, Lau RK, Ye Q, Gu Y, Corbett KD Nucleic Acids Res. 2022 May 20;50(9):5239-5250. doi: 10.1093/nar/gkac343. PMID:35536256<ref>PMID:35536256</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7tb5" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Blankenchip | + | [[Category: Blankenchip, C L]] |
- | [[Category: Corbett | + | [[Category: Corbett, K D]] |
- | [[Category: Lau | + | [[Category: Lau, R K]] |
- | [[Category: Nguyen | + | [[Category: Nguyen, J V]] |
- | [[Category: Ye Q]] | + | [[Category: Ye, Q]] |
+ | [[Category: Dna binding protein]] | ||
+ | [[Category: Helix-turn-helix]] | ||
+ | [[Category: Transcription factor]] | ||
+ | [[Category: Winged helix]] | ||
+ | [[Category: Wyl]] |
Revision as of 08:17, 25 May 2022
Structure of P. aeruginosa PA17 CapW
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