3qeo
From Proteopedia
(Difference between revisions)
Line 1: | Line 1: | ||
==S74E-R104M-D133A dCK variant in complex with L-deoxythymidine and UDP== | ==S74E-R104M-D133A dCK variant in complex with L-deoxythymidine and UDP== | ||
- | <StructureSection load='3qeo' size='340' side='right' caption='[[3qeo]], [[Resolution|resolution]] 1.90Å' scene=''> | + | <StructureSection load='3qeo' size='340' side='right'caption='[[3qeo]], [[Resolution|resolution]] 1.90Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3qeo]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3qeo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QEO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QEO FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=LLT:L-DEOXYTHYMIDINE'>LLT</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LLT:L-DEOXYTHYMIDINE'>LLT</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3qej|3qej]], [[3qen|3qen]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3qej|3qej]], [[3qen|3qen]]</div></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DCK ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DCK ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Deoxycytidine_kinase Deoxycytidine kinase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.74 2.7.1.74] </span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qeo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qeo OCA], [https://pdbe.org/3qeo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qeo RCSB], [https://www.ebi.ac.uk/pdbsum/3qeo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qeo ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [[ | + | [[https://www.uniprot.org/uniprot/DCK_HUMAN DCK_HUMAN]] Required for the phosphorylation of the deoxyribonucleosides deoxycytidine (dC), deoxyguanosine (dG) and deoxyadenosine (dA). Has broad substrate specificity, and does not display selectivity based on the chirality of the substrate. It is also an essential enzyme for the phosphorylation of numerous nucleoside analogs widely employed as antiviral and chemotherapeutic agents.<ref>PMID:18377927</ref> <ref>PMID:20614893</ref> |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
Line 23: | Line 23: | ||
==See Also== | ==See Also== | ||
- | *[[Deoxycytidine kinase|Deoxycytidine kinase]] | + | *[[Deoxycytidine kinase 3D structures|Deoxycytidine kinase 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
Line 30: | Line 30: | ||
[[Category: Deoxycytidine kinase]] | [[Category: Deoxycytidine kinase]] | ||
[[Category: Human]] | [[Category: Human]] | ||
+ | [[Category: Large Structures]] | ||
[[Category: Hazra, S]] | [[Category: Hazra, S]] | ||
[[Category: Lavie, A]] | [[Category: Lavie, A]] |
Revision as of 06:05, 8 June 2022
S74E-R104M-D133A dCK variant in complex with L-deoxythymidine and UDP
|