This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3qo6
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Crystal structure analysis of the plant protease Deg1== | ==Crystal structure analysis of the plant protease Deg1== | ||
| - | <StructureSection load='3qo6' size='340' side='right' caption='[[3qo6]], [[Resolution|resolution]] 2.50Å' scene=''> | + | <StructureSection load='3qo6' size='340' side='right'caption='[[3qo6]], [[Resolution|resolution]] 2.50Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3qo6]] is a 9 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3qo6]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Arath Arath] and [https://en.wikipedia.org/wiki/Miscellaneous_nucleic_acid Miscellaneous nucleic acid]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QO6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QO6 FirstGlance]. <br> |
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr> | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr> | ||
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">At3g27925, Deg1, DEGP, DEGP1, K16N12.18 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">At3g27925, Deg1, DEGP, DEGP1, K16N12.18 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qo6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qo6 OCA], [https://pdbe.org/3qo6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qo6 RCSB], [https://www.ebi.ac.uk/pdbsum/3qo6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qo6 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/DEGP1_ARATH DEGP1_ARATH]] Serine protease that is required at high temperature. May be involved in the degradation of damaged proteins. In vivo, can degrade beta-casein. |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 24: | Line 24: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Arath]] | [[Category: Arath]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Miscellaneous nucleic acid]] | [[Category: Miscellaneous nucleic acid]] | ||
[[Category: Clausen, T]] | [[Category: Clausen, T]] | ||
Revision as of 06:17, 8 June 2022
Crystal structure analysis of the plant protease Deg1
| |||||||||||
