7q0x

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Bovine Trypsin co-crystallized with V(IV)OSO4 and pic==
==Bovine Trypsin co-crystallized with V(IV)OSO4 and pic==
-
<StructureSection load='7q0x' size='340' side='right'caption='[[7q0x]]' scene=''>
+
<StructureSection load='7q0x' size='340' side='right'caption='[[7q0x]], [[Resolution|resolution]] 1.09&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7Q0X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7Q0X FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7q0x]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7Q0X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7Q0X FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7q0x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7q0x OCA], [https://pdbe.org/7q0x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7q0x RCSB], [https://www.ebi.ac.uk/pdbsum/7q0x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7q0x ProSAT]</span></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6PC:PYRIDINE-2-CARBOXYLIC+ACID'>6PC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=O:OXYGEN+ATOM'>O</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=V:VANADIUM+ION'>V</scene></td></tr>
 +
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7q0x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7q0x OCA], [https://pdbe.org/7q0x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7q0x RCSB], [https://www.ebi.ac.uk/pdbsum/7q0x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7q0x ProSAT]</span></td></tr>
</table>
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Vanadium compounds have frequently been proposed as therapeutics, but their application has been hampered by the lack of information on the different V-containing species that may form and how these interact with blood and cell proteins, and with enzymes. Herein, we report several resolved crystal structures of lysozyme with bound V(IV) O(2+) and V(IV) OL(2+) , where L=2,2'-bipyridine or 1,10-phenanthroline (phen), and of trypsin with V(IV) O(picolinato)2 and V(V) O2 (phen)(+) moieties. Computational studies complete the refinement and shed light on the relevant role of hydrophobic interactions, hydrogen bonds, and microsolvation in stabilizating the structure. Noteworthy is that the trypsin-V(V) O2 (phen) and trypsin-V(IV) O(OH)(phen) adducts correspond to similar energies, thus suggesting a possible interconversion under physiological/biological conditions. The obtained data support the relevance of hydrolysis of V(IV) and V(V) complexes in the several types of binding established with proteins and the formation of different adducts that might contribute to their pharmacological action, and significantly widen our knowledge of vanadium-protein interactions.
 +
 +
Binding of V(IV) O(2+) , V(IV) OL, V(IV) OL2 and V(V) O2 L Moieties to Proteins: X-ray/Theoretical Characterization and Biological Implications.,Santos MFA, Sciortino G, Correia I, Fernandes ACP, Santos-Silva T, Pisanu F, Garribba E, Costa Pessoa J Chemistry. 2022 Apr 29:e202200105. doi: 10.1002/chem.202200105. PMID:35486702<ref>PMID:35486702</ref>
 +
 +
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 7q0x" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Correia I]]
+
[[Category: Trypsin]]
-
[[Category: Fernandes ACP]]
+
[[Category: Correia, I]]
-
[[Category: Garribba E]]
+
[[Category: Fernandes, A C.P]]
-
[[Category: Pessoa JC]]
+
[[Category: Garribba, E]]
-
[[Category: Santos MFA]]
+
[[Category: Pessoa, J C]]
-
[[Category: Santos-Silva T]]
+
[[Category: Santos, M F.A]]
-
[[Category: Sciortino G]]
+
[[Category: Santos-Silva, T]]
 +
[[Category: Sciortino, G]]
 +
[[Category: Hydrolase]]
 +
[[Category: Protein-metal binding]]

Revision as of 05:19, 15 June 2022

Bovine Trypsin co-crystallized with V(IV)OSO4 and pic

PDB ID 7q0x

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools