3r8w
From Proteopedia
(Difference between revisions)
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==Structure of 3-isopropylmalate dehydrogenase isoform 2 from Arabidopsis thaliana at 2.2 angstrom resolution== | ==Structure of 3-isopropylmalate dehydrogenase isoform 2 from Arabidopsis thaliana at 2.2 angstrom resolution== | ||
- | <StructureSection load='3r8w' size='340' side='right' caption='[[3r8w]], [[Resolution|resolution]] 2.25Å' scene=''> | + | <StructureSection load='3r8w' size='340' side='right'caption='[[3r8w]], [[Resolution|resolution]] 2.25Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3r8w]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3r8w]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R8W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3R8W FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">At1g80560, IMDH, IMDH2, T21F11.11 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">At1g80560, IMDH, IMDH2, T21F11.11 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/3-isopropylmalate_dehydrogenase 3-isopropylmalate dehydrogenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.85 1.1.1.85] </span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3r8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r8w OCA], [https://pdbe.org/3r8w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3r8w RCSB], [https://www.ebi.ac.uk/pdbsum/3r8w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3r8w ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [[ | + | [[https://www.uniprot.org/uniprot/LEU32_ARATH LEU32_ARATH]] Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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[[Category: 3-isopropylmalate dehydrogenase]] | [[Category: 3-isopropylmalate dehydrogenase]] | ||
[[Category: Arath]] | [[Category: Arath]] | ||
+ | [[Category: Large Structures]] | ||
[[Category: Balogun, S]] | [[Category: Balogun, S]] | ||
[[Category: Chen, S]] | [[Category: Chen, S]] |
Revision as of 05:53, 15 June 2022
Structure of 3-isopropylmalate dehydrogenase isoform 2 from Arabidopsis thaliana at 2.2 angstrom resolution
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Categories: 3-isopropylmalate dehydrogenase | Arath | Large Structures | Balogun, S | Chen, S | Galant, A | He, Y | Jez, J M | Pang, Q | Strul, J M | 3-isopropylmalate | Chloroplast | Dimer | Glucosinolate biosynthesis | Isocitrate and isopropylmalate dehydrogenases family | Leucine biosynthesis | Nadh | Oxidoreductase