3rgw
From Proteopedia
(Difference between revisions)
Line 1: | Line 1: | ||
==Crystal structure at 1.5 A resolution of an H2-reduced, O2-tolerant hydrogenase from Ralstonia eutropha unmasks a novel iron-sulfur cluster== | ==Crystal structure at 1.5 A resolution of an H2-reduced, O2-tolerant hydrogenase from Ralstonia eutropha unmasks a novel iron-sulfur cluster== | ||
- | <StructureSection load='3rgw' size='340' side='right' caption='[[3rgw]], [[Resolution|resolution]] 1.50Å' scene=''> | + | <StructureSection load='3rgw' size='340' side='right'caption='[[3rgw]], [[Resolution|resolution]] 1.50Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3rgw]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3rgw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ralstonia_eutropha Ralstonia eutropha]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RGW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RGW FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=F3S:FE3-S4+CLUSTER'>F3S</scene>, <scene name='pdbligand=F4S:FE4-S3+CLUSTER'>F4S</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NFU:FORMYL[BIS(HYDROCYANATO-1KAPPAC)]IRONNICKEL(FE-NI)'>NFU</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=F3S:FE3-S4+CLUSTER'>F3S</scene>, <scene name='pdbligand=F4S:FE4-S3+CLUSTER'>F4S</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NFU:FORMYL[BIS(HYDROCYANATO-1KAPPAC)]IRONNICKEL(FE-NI)'>NFU</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Hydrogenase_(acceptor) Hydrogenase (acceptor)], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.12.99.6 1.12.99.6] </span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rgw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rgw OCA], [https://pdbe.org/3rgw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rgw RCSB], [https://www.ebi.ac.uk/pdbsum/3rgw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rgw ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [[ | + | [[https://www.uniprot.org/uniprot/MBHL_CUPNH MBHL_CUPNH]] This enzyme recycles the H(2) produced by nitrogenase to increase the production of ATP and to protect nitrogenase against inhibition or damage by O(2) under carbon- or phosphate-limited conditions. [[https://www.uniprot.org/uniprot/MBHS_CUPNH MBHS_CUPNH]] This enzyme recycles the H(2) produced by nitrogenase to increase the production of ATP and to protect nitrogenase against inhibition or damage by O(2) under carbon- or phosphate-limited conditions. |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
Line 23: | Line 23: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
[[Category: Ralstonia eutropha]] | [[Category: Ralstonia eutropha]] | ||
[[Category: Friedrich, B]] | [[Category: Friedrich, B]] |
Revision as of 06:02, 15 June 2022
Crystal structure at 1.5 A resolution of an H2-reduced, O2-tolerant hydrogenase from Ralstonia eutropha unmasks a novel iron-sulfur cluster
|
Categories: Large Structures | Ralstonia eutropha | Friedrich, B | Frielingsdorf, S | Fritsch, J | Kroschinsky, S | Lenz, O | Scheerer, P | Spahn, C M.T | Aerobic hydrogen bacteria | Bimetallic | Dehydrogenase | Dihydrogen | High-resolution crystal structure | Hydrogen | Hydrogen catalysis | Iron | Iron-sulfur cluster | Knallgasbacteria | Membrane | Membrane-bound | Metalloenzyme | Metalloprotein catalytic center | Ni-fe active site | Nickel | Nickel-iron cofactor | Oxidoreductase | Oxidoreductase-oxidoreductase complex | Oxygen-tolerant hydrogenase | Proteobacteria | Reduced state | T-cluster