1hdg

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[[Image:1hdg.jpg|left|200px]]
[[Image:1hdg.jpg|left|200px]]
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{{Structure
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<!--
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|PDB= 1hdg |SIZE=350|CAPTION= <scene name='initialview01'>1hdg</scene>, resolution 2.5&Aring;
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The line below this paragraph, containing "STRUCTURE_1hdg", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Glyceraldehyde-3-phosphate_dehydrogenase_(phosphorylating) Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.12 1.2.1.12] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE= TN10 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 Thermotoga maritima])
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-->
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|DOMAIN=
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{{STRUCTURE_1hdg| PDB=1hdg | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1hdg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hdg OCA], [http://www.ebi.ac.uk/pdbsum/1hdg PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1hdg RCSB]</span>
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}}
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'''THE CRYSTAL STRUCTURE OF HOLO-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM THE HYPERTHERMOPHILIC BACTERIUM THERMOTOGA MARITIMA AT 2.5 ANGSTROMS RESOLUTION'''
'''THE CRYSTAL STRUCTURE OF HOLO-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM THE HYPERTHERMOPHILIC BACTERIUM THERMOTOGA MARITIMA AT 2.5 ANGSTROMS RESOLUTION'''
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==Reference==
==Reference==
The crystal structure of holo-glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophilic bacterium Thermotoga maritima at 2.5 A resolution., Korndorfer I, Steipe B, Huber R, Tomschy A, Jaenicke R, J Mol Biol. 1995 Mar 3;246(4):511-21. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/7877172 7877172]
The crystal structure of holo-glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophilic bacterium Thermotoga maritima at 2.5 A resolution., Korndorfer I, Steipe B, Huber R, Tomschy A, Jaenicke R, J Mol Biol. 1995 Mar 3;246(4):511-21. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/7877172 7877172]
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[[Category: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)]]
 
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
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[[Category: Steipe, B.]]
[[Category: Steipe, B.]]
[[Category: Tomschy, A.]]
[[Category: Tomschy, A.]]
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[[Category: oxidoreductase (aldehy(d)-nad(a))]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 18:43:52 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 21:02:57 2008''
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Revision as of 15:43, 2 May 2008

Template:STRUCTURE 1hdg

THE CRYSTAL STRUCTURE OF HOLO-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM THE HYPERTHERMOPHILIC BACTERIUM THERMOTOGA MARITIMA AT 2.5 ANGSTROMS RESOLUTION


Overview

The crystal structure of holo-glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophile Thermotoga maritima was determined by Patterson search methods using the known structure of the Bacillus stearothermophilus enzyme. The structure was refined at a resolution of 2.5 A to an R-factor of 16.63% for 26289 reflections between 8.0 A an 2.5 A with F > 2 sigma(F). The crystallographic asymmetric unit contains two monomers related by approximate 2-fold symmetry and a tetramer is built up by crystallographic symmetry. The root-mean-square deviation of Ca positions of glyceraldehyde-3-phosphate dehydrogenase from T. maritima and B. stearothermophilus is 0.83 A in the NAD+ binding domains and smaller close to the cofactor. In contrast, the largest deviations in the catalytic domains are found at residues involved in coordination of sulphate ion SO4 339, which most likely marks the site of the attacking inorganic phosphate ion in catalysis. A large number of extra salt-bridges may be an important factor contributing to the high thermostability of this protein.

About this Structure

1HDG is a Single protein structure of sequence from Thermotoga maritima. Full crystallographic information is available from OCA.

Reference

The crystal structure of holo-glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophilic bacterium Thermotoga maritima at 2.5 A resolution., Korndorfer I, Steipe B, Huber R, Tomschy A, Jaenicke R, J Mol Biol. 1995 Mar 3;246(4):511-21. PMID:7877172 Page seeded by OCA on Fri May 2 18:43:52 2008

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