3rk4
From Proteopedia
(Difference between revisions)
Line 1: | Line 1: | ||
==Structure of Rhodococcus rhodochrous haloalkane dehalogenase mutant DhaA31== | ==Structure of Rhodococcus rhodochrous haloalkane dehalogenase mutant DhaA31== | ||
- | <StructureSection load='3rk4' size='340' side='right' caption='[[3rk4]], [[Resolution|resolution]] 1.31Å' scene=''> | + | <StructureSection load='3rk4' size='340' side='right'caption='[[3rk4]], [[Resolution|resolution]] 1.31Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3rk4]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3rk4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacterium_mycoides_roseum"_grotenfelt_1889 "bacterium mycoides roseum" grotenfelt 1889]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RK4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RK4 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3fbw|3fbw]], [[3g9x|3g9x]], [[3fwh|3fwh]], [[1bn6|1bn6]], [[1cqw|1cqw]], [[3rlt|3rlt]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3fbw|3fbw]], [[3g9x|3g9x]], [[3fwh|3fwh]], [[1bn6|1bn6]], [[1cqw|1cqw]], [[3rlt|3rlt]]</div></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dhaA, DhaA31 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dhaA, DhaA31 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1829 "Bacterium mycoides roseum" Grotenfelt 1889])</td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Haloalkane_dehalogenase Haloalkane dehalogenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.8.1.5 3.8.1.5] </span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rk4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rk4 OCA], [https://pdbe.org/3rk4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rk4 RCSB], [https://www.ebi.ac.uk/pdbsum/3rk4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rk4 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [[ | + | [[https://www.uniprot.org/uniprot/DHAA_RHORH DHAA_RHORH]] Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Expresses halogenase activity against 1-chloroalkanes of chain length C3 to C10, and also shows a very weak activity with 1,2-dichloroethane. |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
Line 21: | Line 21: | ||
</div> | </div> | ||
<div class="pdbe-citations 3rk4" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 3rk4" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[Dehalogenase 3D structures|Dehalogenase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
Line 27: | Line 30: | ||
[[Category: Bacterium mycoides roseum grotenfelt 1889]] | [[Category: Bacterium mycoides roseum grotenfelt 1889]] | ||
[[Category: Haloalkane dehalogenase]] | [[Category: Haloalkane dehalogenase]] | ||
+ | [[Category: Large Structures]] | ||
[[Category: Chaloupkova, R]] | [[Category: Chaloupkova, R]] | ||
[[Category: Damborsky, J]] | [[Category: Damborsky, J]] |
Revision as of 10:14, 22 June 2022
Structure of Rhodococcus rhodochrous haloalkane dehalogenase mutant DhaA31
|