3ryp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)==
==Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)==
-
<StructureSection load='3ryp' size='340' side='right' caption='[[3ryp]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
+
<StructureSection load='3ryp' size='340' side='right'caption='[[3ryp]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3ryp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RYP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3RYP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3ryp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RYP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RYP FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CMP:ADENOSINE-3,5-CYCLIC-MONOPHOSPHATE'>CMP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CMP:ADENOSINE-3,5-CYCLIC-MONOPHOSPHATE'>CMP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3qop|3qop]], [[3rdi|3rdi]], [[3rou|3rou]], [[3rpq|3rpq]], [[3ryr|3ryr]]</td></tr>
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3qop|3qop]], [[3rdi|3rdi]], [[3rou|3rou]], [[3rpq|3rpq]], [[3ryr|3ryr]]</div></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">b3357, cap, crp, csm, JW5702 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">b3357, cap, crp, csm, JW5702 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ryp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ryp OCA], [http://pdbe.org/3ryp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ryp RCSB], [http://www.ebi.ac.uk/pdbsum/3ryp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ryp ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ryp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ryp OCA], [https://pdbe.org/3ryp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ryp RCSB], [https://www.ebi.ac.uk/pdbsum/3ryp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ryp ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CRP_ECOLI CRP_ECOLI]] This protein complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons. The protein induces a severe bend in the DNA. Acts as a negative regulator of its own synthesis as well as for adenylate cyclase (cyaA), which generates cAMP.<ref>PMID:2982847</ref>
+
[[https://www.uniprot.org/uniprot/CRP_ECOLI CRP_ECOLI]] This protein complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons. The protein induces a severe bend in the DNA. Acts as a negative regulator of its own synthesis as well as for adenylate cyclase (cyaA), which generates cAMP.<ref>PMID:2982847</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 20:
</div>
</div>
<div class="pdbe-citations 3ryp" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3ryp" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Catabolite gene activator protein 3D structures|Catabolite gene activator protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 25: Line 28:
</StructureSection>
</StructureSection>
[[Category: Ecoli]]
[[Category: Ecoli]]
 +
[[Category: Large Structures]]
[[Category: Knapp, J]]
[[Category: Knapp, J]]
[[Category: Lee, J C]]
[[Category: Lee, J C]]

Revision as of 10:30, 22 June 2022

Domain-domain flexibility leads to allostery within the camp receptor protein (CRP)

PDB ID 3ryp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3ryp"
Personal tools