7pb9
From Proteopedia
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==Crystal structure of tandem WH domains of Vps25 from Odinarchaeota== | ==Crystal structure of tandem WH domains of Vps25 from Odinarchaeota== | ||
| - | <StructureSection load='7pb9' size='340' side='right'caption='[[7pb9]]' scene=''> | + | <StructureSection load='7pb9' size='340' side='right'caption='[[7pb9]], [[Resolution|resolution]] 1.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7PB9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7PB9 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7pb9]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7PB9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7PB9 FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7pb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7pb9 OCA], [https://pdbe.org/7pb9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7pb9 RCSB], [https://www.ebi.ac.uk/pdbsum/7pb9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7pb9 ProSAT]</span></td></tr> | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7pb9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7pb9 OCA], [https://pdbe.org/7pb9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7pb9 RCSB], [https://www.ebi.ac.uk/pdbsum/7pb9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7pb9 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The ESCRT machinery, comprising of multiple proteins and subcomplexes, is crucial for membrane remodelling in eukaryotic cells, in processes that include ubiquitin-mediated multivesicular body formation, membrane repair, cytokinetic abscission, and virus exit from host cells. This ESCRT system appears to have simpler, ancient origins, since many archaeal species possess homologues of ESCRT-III and Vps4, the components that execute the final membrane scission reaction, where they have been shown to play roles in cytokinesis, extracellular vesicle formation and viral egress. Remarkably, metagenome assemblies of Asgard archaea, the closest known living relatives of eukaryotes, were recently shown to encode homologues of the entire cascade involved in ubiquitin-mediated membrane remodelling, including ubiquitin itself, components of the ESCRT-I and ESCRT-II subcomplexes, and ESCRT-III and Vps4. Here, we explore the phylogeny, structure, and biochemistry of Asgard homologues of the ESCRT machinery and the associated ubiquitylation system. We provide evidence for the ESCRT-I and ESCRT-II subcomplexes being involved in ubiquitin-directed recruitment of ESCRT-III, as it is in eukaryotes. Taken together, our analyses suggest a pre-eukaryotic origin for the ubiquitin-coupled ESCRT system and a likely path of ESCRT evolution via a series of gene duplication and diversification events. | ||
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| + | Asgard archaea shed light on the evolutionary origins of the eukaryotic ubiquitin-ESCRT machinery.,Hatano T, Palani S, Papatziamou D, Salzer R, Souza DP, Tamarit D, Makwana M, Potter A, Haig A, Xu W, Townsend D, Rochester D, Bellini D, Hussain HMA, Ettema TJG, Lowe J, Baum B, Robinson NP, Balasubramanian M Nat Commun. 2022 Jun 13;13(1):3398. doi: 10.1038/s41467-022-30656-2. PMID:35697693<ref>PMID:35697693</ref> | ||
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| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 7pb9" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Bellini D]] | + | [[Category: Bellini, D]] |
| - | [[Category: Lowe J]] | + | [[Category: Lowe, J]] |
| - | [[Category: Papatziamou D]] | + | [[Category: Papatziamou, D]] |
| - | [[Category: Robinson | + | [[Category: Robinson, N P]] |
| - | [[Category: Salzer R]] | + | [[Category: Salzer, R]] |
| + | [[Category: Asgard archaea]] | ||
| + | [[Category: Escrt]] | ||
| + | [[Category: Escrt-ii]] | ||
| + | [[Category: Membrane protein]] | ||
| + | [[Category: Membrane trafficking]] | ||
| + | [[Category: Odinarchaeota]] | ||
Revision as of 07:32, 29 June 2022
Crystal structure of tandem WH domains of Vps25 from Odinarchaeota
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