3sh3
From Proteopedia
(Difference between revisions)
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==Crystal structure of a pro-inflammatory lectin from the seeds of Dioclea wilsonii STANDL== | ==Crystal structure of a pro-inflammatory lectin from the seeds of Dioclea wilsonii STANDL== | ||
- | <StructureSection load='3sh3' size='340' side='right' caption='[[3sh3]], [[Resolution|resolution]] 2.30Å' scene=''> | + | <StructureSection load='3sh3' size='340' side='right'caption='[[3sh3]], [[Resolution|resolution]] 2.30Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3sh3]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3sh3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Dioclea_wilsonii Dioclea wilsonii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SH3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SH3 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=A3B:D-VINYLGLYCINE'>A3B</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=XMM:(2R,3S,4S,5S,6R)-2-(5-BROMO-4-CHLORO-1H-INDOL-3-YLOXY)-TETRAHYDRO-6-(HYDROXYMETHYL)-2H-PYRAN-3,4,5-TRIOL'>XMM</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A3B:D-VINYLGLYCINE'>A3B</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=XMM:(2R,3S,4S,5S,6R)-2-(5-BROMO-4-CHLORO-1H-INDOL-3-YLOXY)-TETRAHYDRO-6-(HYDROXYMETHYL)-2H-PYRAN-3,4,5-TRIOL'>XMM</scene></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3rrd|3rrd]], [[3rs6|3rs6]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3rrd|3rrd]], [[3rs6|3rs6]]</div></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3sh3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sh3 OCA], [https://pdbe.org/3sh3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3sh3 RCSB], [https://www.ebi.ac.uk/pdbsum/3sh3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3sh3 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [[ | + | [[https://www.uniprot.org/uniprot/LECA_DIOWI LECA_DIOWI]] D-mannose/D-glucose-binding lectin with hemagglutinating activity towards rabbit and human erythrocytes. In rats, elicits an acute inflammatory response by inducing neutrophil migration and induces dose-dependent paw edema.<ref>PMID:21694673</ref> <ref>PMID:21924319</ref> |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Dioclea wilsonii]] | [[Category: Dioclea wilsonii]] | ||
+ | [[Category: Large Structures]] | ||
[[Category: Assreuy, A M.S]] | [[Category: Assreuy, A M.S]] | ||
[[Category: Bezerra, G A]] | [[Category: Bezerra, G A]] |
Revision as of 07:55, 29 June 2022
Crystal structure of a pro-inflammatory lectin from the seeds of Dioclea wilsonii STANDL
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Categories: Dioclea wilsonii | Large Structures | Assreuy, A M.S | Bezerra, G A | Bezerra, M J.B | Cavada, B S | Delatorre, P | Gruber, K | Nagano, C S | Nascimento, K S | Rangel, T B.A | Rocha, B A.M | Sampaio, A H | Carbohydrate binding protein | Jelly-roll | Legume lectin | Pro-inflammatory effect