This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3vdp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==Structure and biochemical studies of the recombination mediator protein RecR in RecFOR pathway==
==Structure and biochemical studies of the recombination mediator protein RecR in RecFOR pathway==
-
<StructureSection load='3vdp' size='340' side='right' caption='[[3vdp]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
+
<StructureSection load='3vdp' size='340' side='right'caption='[[3vdp]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3vdp]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Caldanaerobacter_subterraneus_subsp._tengcongensis Caldanaerobacter subterraneus subsp. tengcongensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VDP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VDP FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3vdp]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Cals4 Cals4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VDP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VDP FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3vds|3vds]], [[3vdt|3vdt]], [[3vdu|3vdu]], [[3ve5|3ve5]]</td></tr>
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3vds|3vds]], [[3vdt|3vdt]], [[3vdu|3vdu]], [[3ve5|3ve5]]</div></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">recR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273068 Caldanaerobacter subterraneus subsp. tengcongensis])</td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">recR ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273068 CALS4])</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vdp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vdp OCA], [http://pdbe.org/3vdp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3vdp RCSB], [http://www.ebi.ac.uk/pdbsum/3vdp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3vdp ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vdp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vdp OCA], [https://pdbe.org/3vdp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vdp RCSB], [https://www.ebi.ac.uk/pdbsum/3vdp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vdp ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/RECR_CALS4 RECR_CALS4]] May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.[HAMAP-Rule:MF_00017]
+
[[https://www.uniprot.org/uniprot/RECR_CALS4 RECR_CALS4]] May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.[HAMAP-Rule:MF_00017]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 24:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Caldanaerobacter subterraneus subsp. tengcongensis]]
+
[[Category: Cals4]]
 +
[[Category: Large Structures]]
[[Category: Liang, D C]]
[[Category: Liang, D C]]
[[Category: Tang, Q]]
[[Category: Tang, Q]]

Revision as of 18:40, 27 July 2022

Structure and biochemical studies of the recombination mediator protein RecR in RecFOR pathway

PDB ID 3vdp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3vdp"
Personal tools