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3vic
From Proteopedia
(Difference between revisions)
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==Green-fluorescent variant of the non-fluorescent chromoprotein Rtms5== | ==Green-fluorescent variant of the non-fluorescent chromoprotein Rtms5== | ||
| - | <StructureSection load='3vic' size='340' side='right' caption='[[3vic]], [[Resolution|resolution]] 2.20Å' scene=''> | + | <StructureSection load='3vic' size='340' side='right'caption='[[3vic]], [[Resolution|resolution]] 2.20Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3vic]] is a 8 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3vic]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Coral Coral]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VIC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VIC FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr> |
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=QFG:{(4E)-2-[(1E)-4-AMINO-4-OXOBUTANIMIDOYL]-4-BENZYLIDENE-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>QFG</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=QFG:{(4E)-2-[(1E)-4-AMINO-4-OXOBUTANIMIDOYL]-4-BENZYLIDENE-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>QFG</scene></td></tr> | ||
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1mou|1mou]], [[1mov|1mov]], [[2arl|2arl]], [[2p4m|2p4m]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1mou|1mou]], [[1mov|1mov]], [[2arl|2arl]], [[2p4m|2p4m]]</div></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vic FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vic OCA], [https://pdbe.org/3vic PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vic RCSB], [https://www.ebi.ac.uk/pdbsum/3vic PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vic ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [[ | + | [[https://www.uniprot.org/uniprot/NFCP_MONEF NFCP_MONEF]] Thought to play a role in photoprotection of the coral's resident symbiont microalgae's photosystems from photoinhibition caused by high light levels found near the surface of coral reefs.<ref>PMID:12595737</ref> |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Coral]] | [[Category: Coral]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Battad, J M]] | [[Category: Battad, J M]] | ||
[[Category: Byres, E]] | [[Category: Byres, E]] | ||
Revision as of 18:47, 27 July 2022
Green-fluorescent variant of the non-fluorescent chromoprotein Rtms5
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Categories: Coral | Large Structures | Battad, J M | Byres, E | Devenish, R J | Prescott, M | Rossjohn, J | Traore, D A.K | Wilce, M | Acylimine | Anthozoa | Beta barrel | Beta can | Chromoprotein | Fluorescent | Fluorescent protein | Gfp | Peptide-derived chromophore | Pigment | Pocilloporin
