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3vig
From Proteopedia
(Difference between revisions)
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==Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with 1-deoxynojirimycin== | ==Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with 1-deoxynojirimycin== | ||
| - | <StructureSection load='3vig' size='340' side='right' caption='[[3vig]], [[Resolution|resolution]] 0.99Å' scene=''> | + | <StructureSection load='3vig' size='340' side='right'caption='[[3vig]], [[Resolution|resolution]] 0.99Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3vig]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3vig]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Neotermes_koshunensis Neotermes koshunensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VIG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VIG FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NOJ:1-DEOXYNOJIRIMYCIN'>NOJ</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NOJ:1-DEOXYNOJIRIMYCIN'>NOJ</scene></td></tr> |
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3ahz|3ahz]], [[3ai0|3ai0]], [[3vif|3vif]], [[3vih|3vih]], [[3vii|3vii]], [[3vij|3vij]], [[3vik|3vik]], [[3vil|3vil]], [[3vim|3vim]], [[3vin|3vin]], [[3vio|3vio]], [[3vip|3vip]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3ahz|3ahz]], [[3ai0|3ai0]], [[3vif|3vif]], [[3vih|3vih]], [[3vii|3vii]], [[3vij|3vij]], [[3vik|3vik]], [[3vil|3vil]], [[3vim|3vim]], [[3vin|3vin]], [[3vio|3vio]], [[3vip|3vip]]</div></td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NkBG ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NkBG ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=60586 Neotermes koshunensis])</td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Beta-glucosidase Beta-glucosidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.21 3.2.1.21] </span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vig FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vig OCA], [https://pdbe.org/3vig PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vig RCSB], [https://www.ebi.ac.uk/pdbsum/3vig PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vig ProSAT]</span></td></tr> |
</table> | </table> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
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==See Also== | ==See Also== | ||
| - | *[[Beta-glucosidase|Beta-glucosidase]] | + | *[[Beta-glucosidase 3D structures|Beta-glucosidase 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Beta-glucosidase]] | [[Category: Beta-glucosidase]] | ||
| + | [[Category: Large Structures]] | ||
[[Category: Neotermes koshunensis]] | [[Category: Neotermes koshunensis]] | ||
[[Category: Jeng, W Y]] | [[Category: Jeng, W Y]] | ||
Revision as of 18:47, 27 July 2022
Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with 1-deoxynojirimycin
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