3vk1
From Proteopedia
(Difference between revisions)
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==Green-fluorescent variant of the non-fluorescent chromoprotein Rtms5== | ==Green-fluorescent variant of the non-fluorescent chromoprotein Rtms5== | ||
- | <StructureSection load='3vk1' size='340' side='right' caption='[[3vk1]], [[Resolution|resolution]] 2.20Å' scene=''> | + | <StructureSection load='3vk1' size='340' side='right'caption='[[3vk1]], [[Resolution|resolution]] 2.20Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[3vk1]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3vk1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Monef Monef]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VK1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VK1 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr> |
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=QFG:{(4E)-2-[(1E)-4-AMINO-4-OXOBUTANIMIDOYL]-4-BENZYLIDENE-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>QFG</scene></td></tr> | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=QFG:{(4E)-2-[(1E)-4-AMINO-4-OXOBUTANIMIDOYL]-4-BENZYLIDENE-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>QFG</scene></td></tr> | ||
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3vic|3vic]], [[1mou|1mou]], [[1mov|1mov]], [[2arl|2arl]], [[2p4m|2p4m]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3vic|3vic]], [[1mou|1mou]], [[1mov|1mov]], [[2arl|2arl]], [[2p4m|2p4m]]</div></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Rtms5 ([ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Rtms5 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=105610 MONEF])</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vk1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vk1 OCA], [https://pdbe.org/3vk1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vk1 RCSB], [https://www.ebi.ac.uk/pdbsum/3vk1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vk1 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [[ | + | [[https://www.uniprot.org/uniprot/NFCP_MONEF NFCP_MONEF]] Thought to play a role in photoprotection of the coral's resident symbiont microalgae's photosystems from photoinhibition caused by high light levels found near the surface of coral reefs.<ref>PMID:12595737</ref> |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Large Structures]] |
+ | [[Category: Monef]] | ||
[[Category: Battad, J M]] | [[Category: Battad, J M]] | ||
[[Category: Byres, M]] | [[Category: Byres, M]] |
Revision as of 18:49, 27 July 2022
Green-fluorescent variant of the non-fluorescent chromoprotein Rtms5
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Categories: Large Structures | Monef | Battad, J M | Byres, M | Devenish, R J | Prescott, M | Rossjohn, J | Traore, D A.K | Wilce, M | Acylimine | Anthozoa | Beta barrel | Beta can | Chromophore | Chromoprotein | Fluorescent protein | Fluorophore | Gfp | Luminescent protein | Pigment | Pigment protein | Pocilloporin