This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3vl7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
==3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 650 MPa==
==3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 650 MPa==
-
<StructureSection load='3vl7' size='340' side='right' caption='[[3vl7]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
+
<StructureSection load='3vl7' size='340' side='right'caption='[[3vl7]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3vl7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sheon Sheon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VL7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VL7 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3vl7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sheon Sheon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VL7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VL7 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=IPM:3-ISOPROPYLMALIC+ACID'>IPM</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=IPM:3-ISOPROPYLMALIC+ACID'>IPM</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3vlz|3vlz]], [[3vl2|3vl2]], [[3vl3|3vl3]], [[3vl4|3vl4]], [[3vl6|3vl6]]</td></tr>
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3vlz|3vlz]], [[3vl2|3vl2]], [[3vl3|3vl3]], [[3vl4|3vl4]], [[3vl6|3vl6]]</div></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">leuB, SO_4235 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=211586 SHEON])</td></tr>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">leuB, SO_4235 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=211586 SHEON])</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-isopropylmalate_dehydrogenase 3-isopropylmalate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.85 1.1.1.85] </span></td></tr>
+
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/3-isopropylmalate_dehydrogenase 3-isopropylmalate dehydrogenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.85 1.1.1.85] </span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vl7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vl7 OCA], [http://pdbe.org/3vl7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3vl7 RCSB], [http://www.ebi.ac.uk/pdbsum/3vl7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3vl7 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vl7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vl7 OCA], [https://pdbe.org/3vl7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vl7 RCSB], [https://www.ebi.ac.uk/pdbsum/3vl7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vl7 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/LEU3_SHEON LEU3_SHEON]] Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
+
[[https://www.uniprot.org/uniprot/LEU3_SHEON LEU3_SHEON]] Catalyzes the oxidation of 3-carboxy-2-hydroxy-4-methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2-oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 21:
</div>
</div>
<div class="pdbe-citations 3vl7" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3vl7" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Isopropylmalate dehydrogenase|Isopropylmalate dehydrogenase]]
== References ==
== References ==
<references/>
<references/>
Line 26: Line 29:
</StructureSection>
</StructureSection>
[[Category: 3-isopropylmalate dehydrogenase]]
[[Category: 3-isopropylmalate dehydrogenase]]
 +
[[Category: Large Structures]]
[[Category: Sheon]]
[[Category: Sheon]]
[[Category: Nagae, T]]
[[Category: Nagae, T]]

Revision as of 18:51, 27 July 2022

3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 650 MPa

PDB ID 3vl7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3vl7"
Personal tools